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Erschienen in: Archives of Virology 4/2023

01.04.2023 | Brief Report

Characterization and complete genome sequence analysis of the novel phage RPZH3 infecting Ralstonia solanacearum

verfasst von: Zhijian Lin, Gang Gu, Changjiang Chen, Ting Zhou, Fangping Hu, Xueqing Cai

Erschienen in: Archives of Virology | Ausgabe 4/2023

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Abstract

A novel lytic Ralstonia phage, RPZH3, was isolated from the soil of a tobacco field via a double agar overlay plaque assay. The phage has an icosahedral head 75 ± 5 nm in diameter with a short tail about 15 ± 5 nm in length. It was able to infect 18 out of 30 tested strains of R. solanacearum isolated from tobacco, sweet potato, tomato, pepper, and eggplant. The latent period of the phage was 80 min, and the burst period was 60 min with a burst size of about 27 pfu/cell. The phage was stable at pH 4–12 at 28°C, and it was also stable at temperatures from 45°C to 60°C at pH 7.0. The complete genome of phage RPZH3 consists of 65,958 bp, with a GC content of 64.93%. The genome contains 93 open reading frames (ORFs) and encodes a tRNA for cysteine. Nucleotide sequence alignment and phylogenetic analysis indicated that RPZH3 is a new member of the genus Gervaisevirus belonging to the class Caudoviricetes.
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Metadaten
Titel
Characterization and complete genome sequence analysis of the novel phage RPZH3 infecting Ralstonia solanacearum
verfasst von
Zhijian Lin
Gang Gu
Changjiang Chen
Ting Zhou
Fangping Hu
Xueqing Cai
Publikationsdatum
01.04.2023
Verlag
Springer Vienna
Erschienen in
Archives of Virology / Ausgabe 4/2023
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-023-05737-2

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