Introduction: Structure biology of metabolic enzymes is advancing
Target name and description | Genbank ID | PDB IDs | Length | Structure region | Associated disorders (OMIM) | |
---|---|---|---|---|---|---|
AASS | aminoadipate-semialdehyde synthase | 13027640 |
to be deposited
| 926 | 455–926 | Hyperlysinemia type I (238700) |
ACACA | acetyl-CoA carboxylase alpha | 38679960 | 2YL2, 4ASI | 2383 | 118–654 (2YL2), 1608–2375 (4ASI) | ACACA deficiency (613933) |
ACADS | acyl-CoA dehydrogenase, short chain | 4557233 | 2VIG | 412 | 30–412 | ACADS deficiency (201470) |
ACADSB | acyl-CoA dehydrogenase, short/branched chain | 4501859 | 2JIF | 432 | 52–432 | ACADSB deficiency 2-methylbutyryl glycinuria (610006) |
ACADVL | acyl-CoA dehydrogenase, very long chain | 4557235 | 2UXW | 655 | 72–655 | ACADVL deficiency (201475) |
ADA | adenosine deaminase | 47078295 | 3IAR | 363 | 5–363 | Severe combined immunodeficiency (102700) |
ALDH7A1 | aldehyde dehydrogenase 7 family, member A1 | 4557343 | 2J6L | 511 | 1–499 | Pyridoxine-dependent epilepsy (266100) |
CBS | cystathionine-beta-synthase | 4557415 | 4UUU, 4COO | 551 | 406–547 (4UUU), 1–551 (4COO) | homocystinuria due to CBS deficiency (236200) |
CRYBB3 | crystallin, beta B3 | 4758074 | 3QK3 | 211 | 21–199 | Cataract congenital nuclear autosomal recessive type 2 (609741) |
ENO3 | enolase 3 | 153267427 | 2XSX | 434 | 1–434 | Glycogen storage disorder type 13 (612932) |
FH | fumarate hydratase | 19743875 | 3EO4 | 510 | 44–510 | Fumarase deficiency (606812), MCUL (150800), HLRCC (605839) |
FKBP14 | peptidyl-prolyl cis-trans isomerase FKBP14 | 8923659 | 4DIP | 211 | 19–140 | Ehlers-Danlos syndrome types VIA and VIB (614557) |
GALT | galactose-1-phosphate uridylyltransferase | 22165416 | 5IN3 | 379 | 1–379 | Classical galactosemia (230400) |
GBE1 | glucan (1,4-alpha-), branching enzyme 1 | 189458812 | 5CLT, 4BZY, 5CLW | 702 | 38–700 | Glycogen storage disorder type IV (232500), Adult polyglucosan body disease (263570) |
GLRX5 | glutaredoxin 5 | 42516576 | 2WEM, 2WUL | 157 | 35–150 | Anemia sideroblastic pyridoxine-refractory (205950) |
GMDS | GDP-mannose 4,6-dehydratase | 9087147 | 1T2A | 372 | 23–372 | Cerebellar vermis hypoplasia (602884) |
GPD1L | glycerol-3-phosphate dehydrogenase 1-like protein | 24307999 | 2PLA | 351 | 1–349 | Brugada syndrome type 2 (611777) |
GYG1 | glycogenin 1 | 12652581 | 3T7O,3T7O,3U2V,3U2U,3U2X,3U2T,3RMW,3RMV,3QVB,3U2W,3Q4S,3T7N,3T7M | 350 | 1–262 | Glycogen storage disease type 15 (613507) |
HIBCH | 3-hydroxyisobutyryl-CoA hydrolase | 37594471 | 3BPT | 386 | 42–386 | HIBCH deficiency (250620) |
HMGCS2 | 3-hydroxy-3-methylglutaryl-CoA synthase 2 | 5031751 | 2V4W, 2WYA | 508 | 51–508 | HMGCS deficiency (605911) |
HPD | 4-hydroxyphenylpyruvate dioxygenase | 4504477 | 3ISQ | 393 | 8–393 | Tyrosinemia type 3 (276710), hawkinsinuria (140350) |
HPGD | hydroxyprostaglandin dehydrogenase | 1203982 | 2GDZ | 266 | 3–256 | Primary hypertrophic osteoathropathy (259100), isolated congenital nail clubbing (119900) |
HSD17B10 | hydroxyacyl-CoA dehydrogenase, type II | 4758504 | 2O23 | 261 | 1–261 | 2-methyl-3-hydroxybutyryl-CoA dehydrogenase deficiency (300438), mental retardation syndromic X-linked type 10 (300220) |
HSD17B4 | hydroxysteroid (17-beta) dehydrogenase 4 | 4504505 | 1ZBQ | 736 | 1–304 | D-bifunctional protein deficiency (261515) |
ISPD | isoprenoid synthase domain containing | 157412259 | 4CVH | 451 | 43–451 | Muscular dystrophy-dystroglycanopathy congenital with brain and eye anomalies A7 (614643), Muscular dystrophy-dystroglycanopathy limb-girdle C7 (616052) |
MAT1A | methionine adenosyltransferase I, alpha | 4557737 | 2OBV | 395 | 16–395 | methionine adenosyltransferase deficiency (250850) |
1MCCC1-MCCC2 | 3-methylcrotonoyl-CoA carboxylase complex (MCCC1* and MCCC2†) | 13518228* 11545863† |
to be deposited
| 725* and 563† | 48–716* and 18–563† | 3-methylcrotonoyl-CoA carboxylase 1 deficiency (210200) |
MCEE | methylmalonyl CoA epimerase | 188035928 | 3RMU | 176 | 45–176 | Methylmalonyl-CoA epimerase deficiency (251120) |
MLYCD | malonyl-CoA decarboxylase | 6912498 | 2YGW | 454 | 1–451 | MLYCD deficiency (248360) |
MMAA | methylmalonic aciduria type A | 26892295 | 2WWW | 418 | 72–418 | Methylmalonic aciduria type cblA (251100) |
MMACHC | methylmalonic aciduria cblC type, with homocystinuria | 153070822 | 3SOM | 282 | 1–282 | Methylmalonic aciduria cblC |
2MMADHC | methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria | 19527054 | 5A4R | 296 | 129–296 | Methylmalonic aciduria and homocystinuria type cblD (277410) |
1MOCS2A-MOCS2B | molybdopterin synthase complex (MOCS2A* and MOCS2B†) | 28631173* 4758732† |
to be deposited
| 88* and 188† | 9–88* and 27–179† | Molybdenum cofactor deficiency type B (252150) |
MOCS2B | molybdopterin synthase catalytic subunit large subunit MOCS2B | 4758732 | 4AP8 | 188 | 27–179 | Molybdenum cofactor deficiency type B (252150) |
MTR | 5-methyltetrahydrofolate-homocysteine methyltransferase | 4557765 | 4CCZ | 1265 | 16–657 | Homocystinuria-megaloblastic anemia, cblG complementation type (250940) |
MUT | methylmalonyl CoA mutase | 4557767 | 3BIC, 2XIJ, 2XIQ | 750 | 12–750 | Methylmalonic aciduria type mut (251000) |
OXCT1 | 3-oxoacid CoA transferase | 4557817 | 3DLX | 520 | 40–520 | SCOT deficiency (245050) |
PAH | phenylalanine hydroxylase | 4557819 | 5FII | 452 | 19–118 | Phenylketonuria (261600) |
PCCA | propionyl-CoA carboxylase, alpha | 65506442 | 2JKU | 728 | 659–728 | Propionic acidemia type I (606054) |
PHGDH | phosphoglycerate dehydrogenase | 23308577 | 2G76 | 533 | 4–315 | PHGDH deficiency (601815) |
PHYH | phytanoyl-CoA 2-hydroxylase | 5453884 | 2A1X | 338 | 31–338 | Refsum disease (266500) |
PTS | 6-pyruvoyltetrahydropterin synthase | 4506331 | 3I2B | 145 | 7–145 | BH4-deficient hyperphenylalaninemia type A (261640) |
PYCR1 | pyrroline-5-carboxylate reductase 1 | 24797097 | 2IZZ | 319 | 1–300 | Cutis laxa autosomal recessive type 2B (612940) |
PYCS | pyrroline-5-carboxylate synthetase | 21361368 | 2H5G | 795 | 356–795 | Mental retardation-joint hypermobility-skin laxity with or without metabolic abnormalities (612652) |
SNX14B | sorting nexin 14 [isoform b] | 24797143 | 4BGJ | 893 | 505–649 | Spinocerebellar ataxia, autosomal recessive, 20 (616354) |
SPR | sepiapterin reductase | 4507185 | 1Z6Z | 261 | 1–248 | Dystonia DOPA-responsive due to SPR deficiency (612716) |
TGM1 | transglutaminase 1 | 4507475 | 2XZZ | 817 | 693–787 | Ichthyosis lamellar type 1 (242300) |
TH | tyrosine hydroxylase | 88900503 | 2XSN | 497 | 163–497 | Segawa syndrome (605407) |
TPH2 | neuronal tryptophan hydroxylase | 31795563 | 4V06 | 490 | 148–490 | Attention deficit-hyperactivity disorder 7 (613003) |