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Erschienen in: Journal of Digital Imaging 1/2016

01.02.2016

A Segmentation Framework of Pulmonary Nodules in Lung CT Images

verfasst von: Sudipta Mukhopadhyay

Erschienen in: Journal of Imaging Informatics in Medicine | Ausgabe 1/2016

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Abstract

Accurate segmentation of pulmonary nodules is a prerequisite for acceptable performance of computer-aided detection (CAD) system designed for diagnosis of lung cancer from lung CT images. Accurate segmentation helps to improve the quality of machine level features which could improve the performance of the CAD system. The well-circumscribed solid nodules can be segmented using thresholding, but segmentation becomes difficult for part-solid, non-solid, and solid nodules attached with pleura or vessels. We proposed a segmentation framework for all types of pulmonary nodules based on internal texture (solid/part-solid and non-solid) and external attachment (juxta-pleural and juxta-vascular). In the proposed framework, first pulmonary nodules are categorized into solid/part-solid and non-solid category by analyzing intensity distribution in the core of the nodule. Two separate segmentation methods are developed for solid/part-solid and non-solid nodules, respectively. After determining the category of nodule, the particular algorithm is set to remove attached pleural surface and vessels from the nodule body. The result of segmentation is evaluated in terms of four contour-based metrics and six region-based metrics for 891 pulmonary nodules from Lung Image Database Consortium and Image Database Resource Initiative (LIDC/IDRI) public database. The experimental result shows that the proposed segmentation framework is reliable for segmentation of various types of pulmonary nodules with improved accuracy compared to existing segmentation methods.
Literatur
1.
Zurück zum Zitat Alberola-Lopez C, Martín-Fernández M, Ruiz-Alzola J. Comments on: A methodology for evaluation of boundary detection algorithms on medical images. IEEE Trans Med Imaging 2004;23(5):658–660.CrossRefPubMed Alberola-Lopez C, Martín-Fernández M, Ruiz-Alzola J. Comments on: A methodology for evaluation of boundary detection algorithms on medical images. IEEE Trans Med Imaging 2004;23(5):658–660.CrossRefPubMed
2.
Zurück zum Zitat Armato III SG, McLennan G, Bidaut L, McNitt-Gray MF, Meyer CR, Reeves AP, Zhao B, Aberle DR, Henschke CI, Hoffman EA, Kazerooni EA, MacMahon H, Beek EJR, Yankelevitz D, Biancardi AM, Bland PH, Brown MS, Engelmann RM, Laderach GE, Max D, Pais RC, Qing DPY, Roberts RY, Smith AR, Starkey A, Batra P, Caligiuri P, Farooqi A, Gladish GW, Jude CM, Munden RF, Petkovska I, Quint LE, Schwartz LH, Sundaram B, Dodd LE, Fenimore C, Gur D, Petrick N, Freymann J, Kirby J, Hughes B, Casteele AV, Gupte S, Sallam M, Heath MD, Kuhn MH, Dharaiya E, Burns R, Fryd DS, Salganicoff M, Anand V, Shreter U, Vastagh S, Croft BY, Clarke LP. The lung image database consortium (LIDC) and image database resource initiative (IDRI): a completed reference database of lung nodules on CT scans. Med Phys 2011;38 (2):915–931.CrossRef Armato III SG, McLennan G, Bidaut L, McNitt-Gray MF, Meyer CR, Reeves AP, Zhao B, Aberle DR, Henschke CI, Hoffman EA, Kazerooni EA, MacMahon H, Beek EJR, Yankelevitz D, Biancardi AM, Bland PH, Brown MS, Engelmann RM, Laderach GE, Max D, Pais RC, Qing DPY, Roberts RY, Smith AR, Starkey A, Batra P, Caligiuri P, Farooqi A, Gladish GW, Jude CM, Munden RF, Petkovska I, Quint LE, Schwartz LH, Sundaram B, Dodd LE, Fenimore C, Gur D, Petrick N, Freymann J, Kirby J, Hughes B, Casteele AV, Gupte S, Sallam M, Heath MD, Kuhn MH, Dharaiya E, Burns R, Fryd DS, Salganicoff M, Anand V, Shreter U, Vastagh S, Croft BY, Clarke LP. The lung image database consortium (LIDC) and image database resource initiative (IDRI): a completed reference database of lung nodules on CT scans. Med Phys 2011;38 (2):915–931.CrossRef
3.
Zurück zum Zitat Byrd KA, Zeng J, Chouikha M. A validation model for segmentation algorithms of digital mammography images. J Appl Sci Eng Technol 2007;1:41–50. Byrd KA, Zeng J, Chouikha M. A validation model for segmentation algorithms of digital mammography images. J Appl Sci Eng Technol 2007;1:41–50.
4.
Zurück zum Zitat Chalana V, Kim Y. A methodology for evaluation of boundary detection algorithms on medical images. IEEE Trans Med Imaging 1997;16(5):642–652.CrossRefPubMed Chalana V, Kim Y. A methodology for evaluation of boundary detection algorithms on medical images. IEEE Trans Med Imaging 1997;16(5):642–652.CrossRefPubMed
5.
Zurück zum Zitat Dehmeshki J, Amin H, Valdivieso M, Ye X. Segmentation of pulmonary nodules in thoracic CT scans: A region growing approach. IEEE Trans Med Imaging 2008;27(4):467–480.CrossRefPubMed Dehmeshki J, Amin H, Valdivieso M, Ye X. Segmentation of pulmonary nodules in thoracic CT scans: A region growing approach. IEEE Trans Med Imaging 2008;27(4):467–480.CrossRefPubMed
6.
Zurück zum Zitat Diciotti S, Lombardo S, Falchini M, Picozzi G, Mascalchi M. Automated segmentation refinement of small lung nodules in CT scans by local shape analysis. IEEE Trans Biomed Eng 2011;58(12):3418–3428.CrossRefPubMed Diciotti S, Lombardo S, Falchini M, Picozzi G, Mascalchi M. Automated segmentation refinement of small lung nodules in CT scans by local shape analysis. IEEE Trans Biomed Eng 2011;58(12):3418–3428.CrossRefPubMed
7.
Zurück zum Zitat Diciotti S, Picozzi G, Falchini M, Mascalchi M, Villari N, Valli G. 3-D segmentation algorithm of small lung nodules in spiral CT images. IEEE Trans Inf Technol Biomed 2008;12(1):7–19.CrossRefPubMed Diciotti S, Picozzi G, Falchini M, Mascalchi M, Villari N, Valli G. 3-D segmentation algorithm of small lung nodules in spiral CT images. IEEE Trans Inf Technol Biomed 2008;12(1):7–19.CrossRefPubMed
8.
Zurück zum Zitat Henschke CI, Yankelevitz DF, Mirtcheva R, McGuinness G, McCauley D, 0lli S. Miettinen: CT screening for lung cancer: Frequency and significance of part-solid and nonsolid nodules. Am J Roentgenol 2002; 178(5):1053–1057. Henschke CI, Yankelevitz DF, Mirtcheva R, McGuinness G, McCauley D, 0lli S. Miettinen: CT screening for lung cancer: Frequency and significance of part-solid and nonsolid nodules. Am J Roentgenol 2002; 178(5):1053–1057.
9.
Zurück zum Zitat Huttenlocher DP, Klanderman GA, Rucklidge WJ. Comparing images using the hausdorff distance. IEEE Transactions on Pattern Analysis and Machine Intelligence 1993;15(9):850–863.CrossRef Huttenlocher DP, Klanderman GA, Rucklidge WJ. Comparing images using the hausdorff distance. IEEE Transactions on Pattern Analysis and Machine Intelligence 1993;15(9):850–863.CrossRef
10.
Zurück zum Zitat Kauczor HU, Heitmann K, Heussel CP, Marwede D, Uthmann T, Thelen M. Automatic detection and quantification of ground-glass opacities on high-resolution CT using multiple neural networks: comparison with a density mask. Am J Roentgenol 2000;175(5):1329–1334.CrossRef Kauczor HU, Heitmann K, Heussel CP, Marwede D, Uthmann T, Thelen M. Automatic detection and quantification of ground-glass opacities on high-resolution CT using multiple neural networks: comparison with a density mask. Am J Roentgenol 2000;175(5):1329–1334.CrossRef
11.
Zurück zum Zitat Ko JP, Naidich DP. Computer-aided diagnosis and the evaluation of lung disease. J Thorac Imaging 2004; 19(3):136–155.CrossRefPubMed Ko JP, Naidich DP. Computer-aided diagnosis and the evaluation of lung disease. J Thorac Imaging 2004; 19(3):136–155.CrossRefPubMed
12.
Zurück zum Zitat Kostis WJ, Reeves AP, Yankelevitz DF, Henschke CI. Three-dimensional segmentation and growth-rate estimation of small pulmonary nodules in helical ct images. IEEE Trans Med Imaging 2003;22(10):1259–1274.CrossRefPubMed Kostis WJ, Reeves AP, Yankelevitz DF, Henschke CI. Three-dimensional segmentation and growth-rate estimation of small pulmonary nodules in helical ct images. IEEE Trans Med Imaging 2003;22(10):1259–1274.CrossRefPubMed
13.
Zurück zum Zitat Kubota T, Jerebko AK, Dewan M, Salganicoff M, Krishnan A. Segmentation of pulmonary nodules of various densities with morphological approaches and convexity models. Med Image Anal 2011;15(1):133–154.CrossRefPubMed Kubota T, Jerebko AK, Dewan M, Salganicoff M, Krishnan A. Segmentation of pulmonary nodules of various densities with morphological approaches and convexity models. Med Image Anal 2011;15(1):133–154.CrossRefPubMed
14.
Zurück zum Zitat Kuhnigk JM, Dicken V, Bornemann L, Bakai A, Wormanns D, Krass S, Peitgen HO. Morphological segmentation and partial volume analysis for volumetry of solid pulmonary lesions in thoracic CT scans. IEEE Trans Med Imaging 2006;25(4):417–434.CrossRefPubMed Kuhnigk JM, Dicken V, Bornemann L, Bakai A, Wormanns D, Krass S, Peitgen HO. Morphological segmentation and partial volume analysis for volumetry of solid pulmonary lesions in thoracic CT scans. IEEE Trans Med Imaging 2006;25(4):417–434.CrossRefPubMed
15.
Zurück zum Zitat Li Z, Ma L, Jin X, Zheng Z. A new feature-preserving mesh-smoothing algorithm. Vis Comput 2009; 25(2):139–148.CrossRef Li Z, Ma L, Jin X, Zheng Z. A new feature-preserving mesh-smoothing algorithm. Vis Comput 2009; 25(2):139–148.CrossRef
16.
Zurück zum Zitat McNitt-Gray MF, Armato III SG, Meyer CR, Reeves AP, McLennan G, Pais RC, Freymann J, Brown MS, Engelmann RM, Bland PH, Laderach GE, Piker C, Guo J, Towfic Z, Qing PYD, Yankelevitz DF, Aberle DR, Beek EJR, MacMahon H, Kazerooni EA, Croft BY, Clarke LP. The lung image database consortium LIDC data collection process for nodule detection and annotation. Acad Radiol 2007;14(12):1464– 1474.PubMedCentralCrossRefPubMed McNitt-Gray MF, Armato III SG, Meyer CR, Reeves AP, McLennan G, Pais RC, Freymann J, Brown MS, Engelmann RM, Bland PH, Laderach GE, Piker C, Guo J, Towfic Z, Qing PYD, Yankelevitz DF, Aberle DR, Beek EJR, MacMahon H, Kazerooni EA, Croft BY, Clarke LP. The lung image database consortium LIDC data collection process for nodule detection and annotation. Acad Radiol 2007;14(12):1464– 1474.PubMedCentralCrossRefPubMed
17.
Zurück zum Zitat Moltz JH, Kuhnigk JM, Bornemann L, Peitgen H. Segmentation of juxtapleural lung nodules in ct scan based on ellipsoid approximation. First International Workshop on Pulmonary Image Processing, 2008. Moltz JH, Kuhnigk JM, Bornemann L, Peitgen H. Segmentation of juxtapleural lung nodules in ct scan based on ellipsoid approximation. First International Workshop on Pulmonary Image Processing, 2008.
18.
Zurück zum Zitat Perona P, Malik J. Scale-space and edge detection using anisotropic diffusion. IEEE Transactions on Pattern Analysis and Machine Intelligence 1989;12(7):629–639.CrossRef Perona P, Malik J. Scale-space and edge detection using anisotropic diffusion. IEEE Transactions on Pattern Analysis and Machine Intelligence 1989;12(7):629–639.CrossRef
19.
Zurück zum Zitat Reeves AP, Chan AB, Yankelevitz DF, Henschke CI, Kressler B, Kostis WJ. On measuring the change in size of pulmonary nodules. IEEE Trans Med Imaging 2006;25(4):435–450.CrossRefPubMed Reeves AP, Chan AB, Yankelevitz DF, Henschke CI, Kressler B, Kostis WJ. On measuring the change in size of pulmonary nodules. IEEE Trans Med Imaging 2006;25(4):435–450.CrossRefPubMed
20.
Zurück zum Zitat Santos BS, Ferreira C, Silva JS, Silva A, Teixeira L. Quantitative evaluation of a pulmonary contour segmentation algorithm in x-ray computed tomography images 1. Acad Radiol 2004;11(8):868–878.CrossRef Santos BS, Ferreira C, Silva JS, Silva A, Teixeira L. Quantitative evaluation of a pulmonary contour segmentation algorithm in x-ray computed tomography images 1. Acad Radiol 2004;11(8):868–878.CrossRef
21.
Zurück zum Zitat Siegel R, Naishadham D, Jemal A. Cancer statistics, 2013. CA Cancer J Clin 2013;63(1):11–30.CrossRefPubMed Siegel R, Naishadham D, Jemal A. Cancer statistics, 2013. CA Cancer J Clin 2013;63(1):11–30.CrossRefPubMed
22.
Zurück zum Zitat Silva A, Silva JS, Santos BS, Ferreira C. Fast pulmonary contour extraction in x-ray CT images: a methodology and quality assessment. Medical Imaging 2001, 2001, pp 216–224. Silva A, Silva JS, Santos BS, Ferreira C. Fast pulmonary contour extraction in x-ray CT images: a methodology and quality assessment. Medical Imaging 2001, 2001, pp 216–224.
23.
Zurück zum Zitat Silva JS, Santos JB, Roxo D, Martins P, Castela E, Martins R. Algorithm versus physicians variability evaluation in the cardiac chambers extraction. IEEE Trans Inf Technol Biomed 2012;16(5):835–841.CrossRefPubMed Silva JS, Santos JB, Roxo D, Martins P, Castela E, Martins R. Algorithm versus physicians variability evaluation in the cardiac chambers extraction. IEEE Trans Inf Technol Biomed 2012;16(5):835–841.CrossRefPubMed
24.
Zurück zum Zitat Tao Y, Lu L, Dewan M, Chen AY, Corso J, Xuan J, Salganicoff M, Krishnan A. Multi-level ground glass nodule detection and segmentation in ct lung images. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2009, pp 715–723. Springer; 2009. Tao Y, Lu L, Dewan M, Chen AY, Corso J, Xuan J, Salganicoff M, Krishnan A. Multi-level ground glass nodule detection and segmentation in ct lung images. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2009, pp 715–723. Springer; 2009.
25.
Zurück zum Zitat Zhou J, Chang S, Metaxas DN, Zhao B, Ginsberg MS, Schwartz LH. An automatic method for ground glass opacity nodule detection and segmentation from CT studies. Engineering in Medicine and Biology Society, EMBS’06, pp 3062–3065; 2006. Zhou J, Chang S, Metaxas DN, Zhao B, Ginsberg MS, Schwartz LH. An automatic method for ground glass opacity nodule detection and segmentation from CT studies. Engineering in Medicine and Biology Society, EMBS’06, pp 3062–3065; 2006.
Metadaten
Titel
A Segmentation Framework of Pulmonary Nodules in Lung CT Images
verfasst von
Sudipta Mukhopadhyay
Publikationsdatum
01.02.2016
Verlag
Springer US
Erschienen in
Journal of Imaging Informatics in Medicine / Ausgabe 1/2016
Print ISSN: 2948-2925
Elektronische ISSN: 2948-2933
DOI
https://doi.org/10.1007/s10278-015-9801-9

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