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Erschienen in: Cellular Oncology 4/2013

01.07.2013 | Original Paper

Promoter hypermethylation contributes to the frequent suppression of the CDK10 gene in human nasopharyngeal carcinomas

verfasst von: Yanjie You, Wenjun Yang, Zhizhong Wang, Huimin Zhu, Haijun Li, Canfeng Lin, Yonggang Ran

Erschienen in: Cellular Oncology | Ausgabe 4/2013

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Abstract

Background

Previous studies have shown a down-regulation of the gene encoding cyclin-dependent kinase 10 (CDK10) in hepatocellular carcinomas. Here we provide evidence that down-regulation of the CDK10 gene is mediated by promoter hypermethylation in primary human nasopharyngeal carcinomas (NPC) and NPC-derived cell lines.

Methods

RT-PCR, Western blotting, methylation-specific PCR and bisulfite sequencing were performed to assess the expression and methylation status of the CDK10 gene in primary NPC samples, NPC-derived cell lines and patient-derived peripheral blood samples. The NPC-derived cell line CNE-2 was selected for treatment with a methylation inhibitor to restore CDK10 expression. In addition, cell proliferation, invasion and colony formation assays were performed to assess the inhibitory effects of ectopic CDK10 expression in CNE-2 cells.

Results

Down-regulation of CDK10 expression in primary NPC samples (23/40, 57.5 %) was found to be significantly correlated with the methylation status of its promoter CpG island (21/40, 52.5 %). Demethylation by 5-aza-dC treatment led to reactivation of the CDK10 gene in the CNE-2 cell line. Additionally, exogenous expression of CDK10 in CNE-2 cells strongly suppressed its growth, invasion and colony formation capacities. The high sensitivity (15/40, 37.5 %) and specificity (0 % false positives) of detecting CDK10 promoter hypermethylation in NPC patient-derived peripheral blood samples suggest that it could be employed as an epigenetic marker for noninvasive cancer diagnosis and recurrence screening.

Conclusion

Our findings implicate that aberrant methylation of the CDK10 gene promoter occurs frequently in NPC, and that reactivation of CDK10 might be utilized as a novel epigenetic strategy for the treatment of NPC patients.
Literatur
1.
Zurück zum Zitat G. Niedobitek, Epstein-Barr virus infection in the pathogenesis of nasopharyngeal carcinoma. Mol. Pathol. 53, 248–54 (2000)PubMedCrossRef G. Niedobitek, Epstein-Barr virus infection in the pathogenesis of nasopharyngeal carcinoma. Mol. Pathol. 53, 248–54 (2000)PubMedCrossRef
2.
Zurück zum Zitat G. Sanguineti, F.B. Geara, A.S. Garden, S.L. Tucker, K.K. Ang, W.H. Morrison, L.J. Peters, Carcinoma of the nasopharynx treated by radiotherapy alone: determinants of local and regional control. Int. J. Radiat. Oncol. Biol. Phys. 37, 985–96 (1997)PubMedCrossRef G. Sanguineti, F.B. Geara, A.S. Garden, S.L. Tucker, K.K. Ang, W.H. Morrison, L.J. Peters, Carcinoma of the nasopharynx treated by radiotherapy alone: determinants of local and regional control. Int. J. Radiat. Oncol. Biol. Phys. 37, 985–96 (1997)PubMedCrossRef
3.
Zurück zum Zitat X. Graña, P.P. Claudio, A. De Luca, N. Sang, A. Giordano, PISSLRE, a human novel CDC2-related protein kinase. Oncogene 9, 2097–2103 (1994)PubMed X. Graña, P.P. Claudio, A. De Luca, N. Sang, A. Giordano, PISSLRE, a human novel CDC2-related protein kinase. Oncogene 9, 2097–2103 (1994)PubMed
4.
Zurück zum Zitat R. Brambilla, G. Draetta, Molecular cloning of PISSLRE, a novel putative member of the cdk family of protein serine/threonine kinases. Oncogene 9, 3037–3041 (1994)PubMed R. Brambilla, G. Draetta, Molecular cloning of PISSLRE, a novel putative member of the cdk family of protein serine/threonine kinases. Oncogene 9, 3037–3041 (1994)PubMed
5.
Zurück zum Zitat F. Bullrich, T.K. MacLachlan, N. Sang, T. Druck, M.L. Veronese, S.L. Allen, N. Chiorazzi, A. Koff, K. Heubner, C.M. Croce et al., Chromosomal mapping of members of the cdc2 family of protein kinases, cdk3, cdk6, PISSLRE, and PITALRE, and a cdk inhibitor, p27Kip1, to regions involved in human cancer. Cancer Res. 55, 1199–1205 (1995)PubMed F. Bullrich, T.K. MacLachlan, N. Sang, T. Druck, M.L. Veronese, S.L. Allen, N. Chiorazzi, A. Koff, K. Heubner, C.M. Croce et al., Chromosomal mapping of members of the cdc2 family of protein kinases, cdk3, cdk6, PISSLRE, and PITALRE, and a cdk inhibitor, p27Kip1, to regions involved in human cancer. Cancer Res. 55, 1199–1205 (1995)PubMed
6.
Zurück zum Zitat J. Crawford, L. Ianzano, M. Savino, S. Whitmore, A.M. Cleton-Jansen, C. Settasatian, M. d’apolito, R. Seshadri, J.C. Pronk, A.D. Auerbach, P.C. Verlander, C.G. Mathew, A.J. Tipping, N.A. Doggett, L. Zelante, D.F. Callen, A. Savoia, The PISSLRE gene: Structure, exon skipping, and exclusion as tumor suppressor in breast cancer. Genomics 56, 90–97 (1999)PubMedCrossRef J. Crawford, L. Ianzano, M. Savino, S. Whitmore, A.M. Cleton-Jansen, C. Settasatian, M. d’apolito, R. Seshadri, J.C. Pronk, A.D. Auerbach, P.C. Verlander, C.G. Mathew, A.J. Tipping, N.A. Doggett, L. Zelante, D.F. Callen, A. Savoia, The PISSLRE gene: Structure, exon skipping, and exclusion as tumor suppressor in breast cancer. Genomics 56, 90–97 (1999)PubMedCrossRef
7.
Zurück zum Zitat J.H. Yu, X.Y. Zhong, W.G. Zhang, Z.D. Wang, Q. Dong, S. Tai, H. Li, Y.F. Cui, CDK10 functions as a tumor suppressor gene and regulates survivability of biliary tract cancer cells. Oncol Rep. 27, 1266–1276 (2012)PubMed J.H. Yu, X.Y. Zhong, W.G. Zhang, Z.D. Wang, Q. Dong, S. Tai, H. Li, Y.F. Cui, CDK10 functions as a tumor suppressor gene and regulates survivability of biliary tract cancer cells. Oncol Rep. 27, 1266–1276 (2012)PubMed
8.
Zurück zum Zitat X.Y. Zhong, X.X. Xu, J.H. Yu, G.X. Jiang, Y. Yu, S. Tai, Z.D. Wang, Y.F. Cui, Clinical and biological significance of Cdk10 in hepatocellular carcinoma. Gene 498, 68–74 (2012)PubMedCrossRef X.Y. Zhong, X.X. Xu, J.H. Yu, G.X. Jiang, Y. Yu, S. Tai, Z.D. Wang, Y.F. Cui, Clinical and biological significance of Cdk10 in hepatocellular carcinoma. Gene 498, 68–74 (2012)PubMedCrossRef
9.
Zurück zum Zitat M. Guo, J. Ren, M.V. Brock, J.G. Herman, H.E. Carraway, Promoter methylation of HIN-1 in the progression to esophageal squamous cancer. Epigenetics. 3, 336–41 (2008)PubMedCrossRef M. Guo, J. Ren, M.V. Brock, J.G. Herman, H.E. Carraway, Promoter methylation of HIN-1 in the progression to esophageal squamous cancer. Epigenetics. 3, 336–41 (2008)PubMedCrossRef
10.
Zurück zum Zitat Y.H. Baek, E. Chang, Y.J. Kim, B.K. Kim, J.H. Sohn, D.I. Park, Stool methylation-specific polymerase chain reaction assay for the detection of colorectal neoplasia in Korean patients. Dis. Colon Rectum 52, 1452–1459 (2009)PubMedCrossRef Y.H. Baek, E. Chang, Y.J. Kim, B.K. Kim, J.H. Sohn, D.I. Park, Stool methylation-specific polymerase chain reaction assay for the detection of colorectal neoplasia in Korean patients. Dis. Colon Rectum 52, 1452–1459 (2009)PubMedCrossRef
11.
Zurück zum Zitat Y.K. Bae, Y.R. Shim, J.H. Choi, M.J. Kim, E. Gabrielson, S.J. Lee, T.Y. Hwang, S.O. Shin, Gene promoter hypermethylation in tumors and plasma of breast cancer patients. Cancer Res. Treat. 37, 233–240 (2005)PubMedCrossRef Y.K. Bae, Y.R. Shim, J.H. Choi, M.J. Kim, E. Gabrielson, S.J. Lee, T.Y. Hwang, S.O. Shin, Gene promoter hypermethylation in tumors and plasma of breast cancer patients. Cancer Res. Treat. 37, 233–240 (2005)PubMedCrossRef
12.
Zurück zum Zitat W. Zhu, W. Qin, J.E. Hewett, E.R. Sauter, Quantitative evaluation of DNA hypermethylation in malignant and benign breast tissue and fluids. Int. J. Cancer 126, 474–482 (2010)PubMedCrossRef W. Zhu, W. Qin, J.E. Hewett, E.R. Sauter, Quantitative evaluation of DNA hypermethylation in malignant and benign breast tissue and fluids. Int. J. Cancer 126, 474–482 (2010)PubMedCrossRef
13.
Zurück zum Zitat Y. Ran, S. Wu, Y. You, Demethylation of E-cadherin gene in nasopharyngeal carcinoma could serve as a potential therapeutic strategy. J. Biochem. 149, 49–54 (2011)PubMedCrossRef Y. Ran, S. Wu, Y. You, Demethylation of E-cadherin gene in nasopharyngeal carcinoma could serve as a potential therapeutic strategy. J. Biochem. 149, 49–54 (2011)PubMedCrossRef
14.
Zurück zum Zitat E. Iorns, N.C. Turner, R. Elliott, N. Syed, O. Garrone, M. Gasco, A.N. Tutt, T. Crook, C.J. Lord, A. Ashworth, Identification of CDK10 as an important determinant of resistance to endocrine therapy for breast cancer. Cancer Cell. 13, 91–104 (2008)PubMedCrossRef E. Iorns, N.C. Turner, R. Elliott, N. Syed, O. Garrone, M. Gasco, A.N. Tutt, T. Crook, C.J. Lord, A. Ashworth, Identification of CDK10 as an important determinant of resistance to endocrine therapy for breast cancer. Cancer Cell. 13, 91–104 (2008)PubMedCrossRef
15.
Zurück zum Zitat S.A. Ahrendt, J.T. Chow, L.H. Xu, S.C. Yang, C.F. Eisenberger, M. Esteller, J.G. Herman, L. Wu, P.A. Decker, J. Jen, D. Sidransky, Molecular detection of tumor cells in bronchoalveolar lavage fluid from patients with early stage lung cancer. J Natl Cancer Inst 91, 332–339 (1999)PubMedCrossRef S.A. Ahrendt, J.T. Chow, L.H. Xu, S.C. Yang, C.F. Eisenberger, M. Esteller, J.G. Herman, L. Wu, P.A. Decker, J. Jen, D. Sidransky, Molecular detection of tumor cells in bronchoalveolar lavage fluid from patients with early stage lung cancer. J Natl Cancer Inst 91, 332–339 (1999)PubMedCrossRef
16.
Zurück zum Zitat S.L. Rosas, W. Koch, M.G. da Costa Carvalho, L. Wu, J. Califano, W. Westra, J. Jen, D. Sidransky, Promoter hypermethylation patterns of p16, O6-methylguanine-DNA-methyltransferase, and death-associated protein kinase in tumors and saliva of head and neck cancer patients. Cancer Res. 61, 939–942 (2001)PubMed S.L. Rosas, W. Koch, M.G. da Costa Carvalho, L. Wu, J. Califano, W. Westra, J. Jen, D. Sidransky, Promoter hypermethylation patterns of p16, O6-methylguanine-DNA-methyltransferase, and death-associated protein kinase in tumors and saliva of head and neck cancer patients. Cancer Res. 61, 939–942 (2001)PubMed
17.
Zurück zum Zitat D. Sun, Z. Zhang, N. Van do, G. Huang, I. Ernberg, L. Hu, Aberrant methylation of CDH13 gene in nasopharyngeal carcinoma could serve as a potential diagnostic biomarker. Oral Oncol 43, 82–87 (2007)PubMedCrossRef D. Sun, Z. Zhang, N. Van do, G. Huang, I. Ernberg, L. Hu, Aberrant methylation of CDH13 gene in nasopharyngeal carcinoma could serve as a potential diagnostic biomarker. Oral Oncol 43, 82–87 (2007)PubMedCrossRef
18.
Zurück zum Zitat A.C. Hoffmann, D. Vallböhmer, K. Prenzel, R. Metzger, M. Heitmann, S. Neiss, F. Ling, A.H. Hölscher, P.M. Schneider, J. Brabender, Methylated DAPK and APC promoter DNA detection in peripheral blood is significantly associated with apparent residual tumor and outcome. J. Cancer Res. Clin. Oncol. 135, 1231–1237 (2009)PubMedCrossRef A.C. Hoffmann, D. Vallböhmer, K. Prenzel, R. Metzger, M. Heitmann, S. Neiss, F. Ling, A.H. Hölscher, P.M. Schneider, J. Brabender, Methylated DAPK and APC promoter DNA detection in peripheral blood is significantly associated with apparent residual tumor and outcome. J. Cancer Res. Clin. Oncol. 135, 1231–1237 (2009)PubMedCrossRef
19.
Zurück zum Zitat Y. You, X. Xue, M. Li, X. Qin, C. Zhang, W. Wang, C. Jiang, S. Wu, Y. Liu, W. Zhu, Y. Ran, Z. Zhang, W. Han, Y. Zhang, Inhibition effect of pcDNA-tum-5 on the growth of S180 tumor. Cytotechnology 56, 97–104 (2008)PubMedCrossRef Y. You, X. Xue, M. Li, X. Qin, C. Zhang, W. Wang, C. Jiang, S. Wu, Y. Liu, W. Zhu, Y. Ran, Z. Zhang, W. Han, Y. Zhang, Inhibition effect of pcDNA-tum-5 on the growth of S180 tumor. Cytotechnology 56, 97–104 (2008)PubMedCrossRef
20.
Zurück zum Zitat G. Heller, B. Ziegler, A. Brandstetter, S. Novak, M. Rudas, G. Hennig, M. Gehrmann, T. Acht, S. Zöchbauer-Müller, M. Filipits, CDK10 is not a target for aberrant DNA methylation in breast cancer. Anticancer. Res. 29, 3939–3944 (2009)PubMed G. Heller, B. Ziegler, A. Brandstetter, S. Novak, M. Rudas, G. Hennig, M. Gehrmann, T. Acht, S. Zöchbauer-Müller, M. Filipits, CDK10 is not a target for aberrant DNA methylation in breast cancer. Anticancer. Res. 29, 3939–3944 (2009)PubMed
21.
Zurück zum Zitat H.W. Chang, A. Chan, D.L. Kwong, W.I. Wei, J.S. Sham, A.P. Yuen, Evaluation of hypermethylated tumor suppressor genes as tumor markers in mouth and throat rinsing fluid, nasopharyngeal swab and peripheral blood of nasopharygeal carcinoma patient. Int. J. Cancer 105, 851–855 (2003)PubMedCrossRef H.W. Chang, A. Chan, D.L. Kwong, W.I. Wei, J.S. Sham, A.P. Yuen, Evaluation of hypermethylated tumor suppressor genes as tumor markers in mouth and throat rinsing fluid, nasopharyngeal swab and peripheral blood of nasopharygeal carcinoma patient. Int. J. Cancer 105, 851–855 (2003)PubMedCrossRef
22.
Zurück zum Zitat Y.J. You, Y.P. Chen, X.X. Zheng, S.J. Meltzer, H. Zhang, Aberrant methylation of the NPC gene in peripheral blood as a potential biomarker in esophageal squamous cell carcinoma patients. Cancer Lett. 315, 138–144 (2012)PubMedCrossRef Y.J. You, Y.P. Chen, X.X. Zheng, S.J. Meltzer, H. Zhang, Aberrant methylation of the NPC gene in peripheral blood as a potential biomarker in esophageal squamous cell carcinoma patients. Cancer Lett. 315, 138–144 (2012)PubMedCrossRef
Metadaten
Titel
Promoter hypermethylation contributes to the frequent suppression of the CDK10 gene in human nasopharyngeal carcinomas
verfasst von
Yanjie You
Wenjun Yang
Zhizhong Wang
Huimin Zhu
Haijun Li
Canfeng Lin
Yonggang Ran
Publikationsdatum
01.07.2013
Verlag
Springer Netherlands
Erschienen in
Cellular Oncology / Ausgabe 4/2013
Print ISSN: 2211-3428
Elektronische ISSN: 2211-3436
DOI
https://doi.org/10.1007/s13402-013-0137-5

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