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15.11.2021 | Original Article

Molecular epidemiology of extended-spectrum beta-lactamase–producing extra-intestinal pathogenic Escherichia coli strains over a 2-year period (2017–2019) from Zimbabwe

verfasst von: Faustinos Tatenda Takawira, Johann DD Pitout, Gaetän Thilliez, Tapfumanei Mashe, Ana Victoria Gutierrez, Robert A Kingsley, Gisele Peirano, Jorge Matheu, Stanley M Midzi, Lusubilo W Mwamakamba, David L Gally, Andrew Tarupiwa, Leckson Mukavhi, Marthie M Ehlers, Sekesai Mtapuri-Zinyowera, Marleen M Kock

Erschienen in: European Journal of Clinical Microbiology & Infectious Diseases

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Abstract

This study was designed to characterize extended-spectrum beta-lactamase (ESBL)–producing extra-intestinal pathogenic Escherichia coli (E.coli) (ExPEC) associated with urinary tract infections in nine different geographic regions of Zimbabwe over a 2-year period (2017–2019). A total of 48 ESBL-positive isolates from urine specimen were selected for whole-genome sequencing from 1246 Escherichia coli isolates biobanked at the National Microbiology Reference laboratory using phenotypic susceptibility testing results from the National Escherichia coli Surveillance Programme to provide representation of different geographical regions and year of isolation. The majority of ESBL E. coli isolates produced cefotaximase-Munich (CTX-M)-15, CTX-M-27, and CTX-M-14. In this study, sequence types (ST) 131 and ST410 were the most predominant antimicrobial-resistant clones and responsible for the increase in ESBL–producing E. coli strains since 2017. Novel ST131 complex strains were recorded during the period 2017 to 2018, thus showing the establishment and evolution of this antimicrobial-resistant ESBL clone in Zimbabwe posing an important public health threat. Incompatibility group F plasmids were predominant among ST131 and ST410 isolates with the following replicons recorded most frequently: F1:A2:B20 (9/19, 47%), F2:A1: B (5/19, 26%), and F1:A1:B49 (8/13, 62%). The results indicate the need for continuous tracking of different ESBL ExPEC clones on a global scale, while targeting specific STs (e.g. ST131 and ST410) through control programs will substantially decrease the spread of ESBLs among ExPEC.
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Metadaten
Titel
Molecular epidemiology of extended-spectrum beta-lactamase–producing extra-intestinal pathogenic Escherichia coli strains over a 2-year period (2017–2019) from Zimbabwe
verfasst von
Faustinos Tatenda Takawira
Johann DD Pitout
Gaetän Thilliez
Tapfumanei Mashe
Ana Victoria Gutierrez
Robert A Kingsley
Gisele Peirano
Jorge Matheu
Stanley M Midzi
Lusubilo W Mwamakamba
David L Gally
Andrew Tarupiwa
Leckson Mukavhi
Marthie M Ehlers
Sekesai Mtapuri-Zinyowera
Marleen M Kock
Publikationsdatum
15.11.2021
Verlag
Springer Berlin Heidelberg
Erschienen in
European Journal of Clinical Microbiology & Infectious Diseases
Print ISSN: 0934-9723
Elektronische ISSN: 1435-4373
DOI
https://doi.org/10.1007/s10096-021-04379-z

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