Clear cell borderline tumor (CCBT), also known as atypical proliferative clear cell tumor, represents less than 1% of all BOT [
5,
124,
125]. It usually occurs between 59 and 68 years of age. Tumors average 6 cm in diameter and are generally unilateral. The majority have a solid appearance with small cysts (“swiss cheese” pattern), similar to clear cell adenofibroma but with some softer, fleshier areas. A minority arise within atypical endometriotic cysts. CCBTs are highly likely to be associated with foci of frank clear cell carcinoma, so extensive sectioning, preferably submitting the entire specimen, is recommended. Given its rarity, few specific molecular studies have been conducted, but there is a strong association with endometriosis, often atypical [
110]. When seen adjacent to clear cell carcinoma, a shared loss of ARID1A expression suggests a clonal relationship [
126]. The frequency of PIK3CA mutations, an early event in clear cell carcinoma, has not been studied in adenofibromatous-type CCBT. Histologically, CCBTs are characterized by round to oval evenly spaced glands embedded in an adenofibromatous-type stroma (Fig.
7a). Compared with clear cell adenofibroma, there is more glandular crowding and proliferation. Glands are lined by flat, cuboidal, or hobnail cells with moderate nuclear atypia (Fig.
7b), small nucleoli, and coarse chromatin clumping. Mitotic rate should be less than four per high power field. The key discriminating feature is the degree of nuclear atypia. Low-grade atypia characterizes adenomas whereas an intermediate nuclear grade defines the borderline category. Clear cell carcinoma is characterized by at least focal high-grade nuclear atypia with prominent nucleoli (Fig.
7d), commonly in a background of intermediate nuclear atypia, and often associated with hyalinized stroma [
127]. However, nuclear grading is highly subjective and diagnosis should err on the side of malignancy, particularly in the tubulocystic variant which can often appear deceptively bland. Similarly, a purely cystic growth pattern is very unusual in CCBT and should raise suspicion for the intracystic variant of clear cell carcinoma (Fig.
7c). Immunostains for HNF1 and Napsin A (usually positive) and WT1 and estrogen and progesterone receptors (usually negative) may be helpful to establish clear cell differentiation in some cases. Microinvasion is defined similarly to other BOT (<5 mm). Although it has been stated that CCBT may show intraepithelial carcinoma, this diagnosis should be made with great discretion in view of the frequency of co-existent clear cell carcinoma. All CCBTs followed thus far have acted in a benign fashion. However, there is no data regarding the prognosis of cases with either intraepithelial carcinoma or microinvasion.