Skip to main content
Erschienen in: Skeletal Radiology 4/2020

23.11.2019 | Scientific Article

The exploration of feature extraction and machine learning for predicting bone density from simple spine X-ray images in a Korean population

verfasst von: Sangwoo Lee, Eun Kyung Choe, Hae Yeon Kang, Ji Won Yoon, Hua Sun Kim

Erschienen in: Skeletal Radiology | Ausgabe 4/2020

Einloggen, um Zugang zu erhalten

Abstract

Objective

Osteoporosis is hard to detect before it manifests symptoms and complications. In this study, we evaluated machine learning models for identifying individuals with abnormal bone mineral density (BMD) through an analysis of spine X-ray features extracted by deep learning to alert high-risk osteoporosis populations.

Materials and methods

We retrospectively used data obtained from health check-ups including spine X-ray and dual-energy X-ray absorptiometry (DXA). Consecutively, we selected people with normal and abnormal bone mineral density. From the regions of interest of X-ray images, deep convolutional networks were used to generate image features. We designed prediction models for abnormal BMD using the image features trained by machine learning classification algorithms. The performances of each model were evaluated.

Results

From 334 participants, 170 images of abnormal (T scores < − 1.0 standard deviations (SD)) and 164 of normal BMD (T scores > = − 1.0 SD) were used for analysis. We found that a combination of feature extraction by VGGnet and classification by random forest based on the maximum balanced classification rate (BCR) yielded the best performance in terms of the area under the curve (AUC) (0.74), accuracy (0.71), sensitivity (0.81), specificity (0.60), BCR (0.70), and F1-score (0.73).

Conclusion

In this study, we explored various machine learning algorithms for the prediction of BMD using simple spine X-ray image features extracted by three deep learning algorithms. We identified the combination for the best performance in predicting high-risk populations with abnormal BMD.
Literatur
1.
Zurück zum Zitat Yang J, Pham SM, Crabbe DL. Effects of oestrogen deficiency on rat mandibular and tibial microarchitecture. Dentomaxillofac Radiol. 2003;32(4):247–51.CrossRef Yang J, Pham SM, Crabbe DL. Effects of oestrogen deficiency on rat mandibular and tibial microarchitecture. Dentomaxillofac Radiol. 2003;32(4):247–51.CrossRef
2.
Zurück zum Zitat Lee JJ, Aghdassi E, Cheung AM, et al. Ten-year absolute fracture risk and hip bone strength in Canadian women with systemic lupus erythematosus. J Rheumatol. 2012;39(7):1378–84.CrossRef Lee JJ, Aghdassi E, Cheung AM, et al. Ten-year absolute fracture risk and hip bone strength in Canadian women with systemic lupus erythematosus. J Rheumatol. 2012;39(7):1378–84.CrossRef
3.
Zurück zum Zitat Kanis JA. Diagnosis of osteoporosis and assessment of fracture risk. Lancet. 2002;359(9321):1929–36.CrossRef Kanis JA. Diagnosis of osteoporosis and assessment of fracture risk. Lancet. 2002;359(9321):1929–36.CrossRef
4.
Zurück zum Zitat Demontiero O, Vidal C, Duque G. Aging and bone loss: new insights for the clinician. Ther Adv Musculoskelet Dis. 2012;4(2):61–76.CrossRef Demontiero O, Vidal C, Duque G. Aging and bone loss: new insights for the clinician. Ther Adv Musculoskelet Dis. 2012;4(2):61–76.CrossRef
5.
Zurück zum Zitat Lee EY, Kim HC, Rhee Y, et al. The Korean urban rural elderly cohort study: study design and protocol. BMC Geriatr. 2014;14:33.CrossRef Lee EY, Kim HC, Rhee Y, et al. The Korean urban rural elderly cohort study: study design and protocol. BMC Geriatr. 2014;14:33.CrossRef
6.
Zurück zum Zitat Ha YC, Kim HY, Jang S, Lee YK, Kim TY. Economic burden of osteoporosis in South Korea: claim data of the national health insurance service from 2008 to 2011. Calcif Tissue Int. 2017;101(6):623–30.CrossRef Ha YC, Kim HY, Jang S, Lee YK, Kim TY. Economic burden of osteoporosis in South Korea: claim data of the national health insurance service from 2008 to 2011. Calcif Tissue Int. 2017;101(6):623–30.CrossRef
7.
Zurück zum Zitat Rehman DE, Qureshi S, Haq AA. Early detection of osteoporosis from incisure depth of human mandible in an orthopantomogram. J Pak Med Assoc. 2014;64(7):766–9.PubMed Rehman DE, Qureshi S, Haq AA. Early detection of osteoporosis from incisure depth of human mandible in an orthopantomogram. J Pak Med Assoc. 2014;64(7):766–9.PubMed
8.
Zurück zum Zitat Choi YJ, Oh HJ, Kim DJ, et al. The prevalence of osteoporosis in Korean adults aged 50 years or older and the higher diagnosis rates in women who were beneficiaries of a national screening program: the Korea National Health and Nutrition Examination Survey 2008–2009. J Bone Miner Res. 2012;27(9):1879–86.CrossRef Choi YJ, Oh HJ, Kim DJ, et al. The prevalence of osteoporosis in Korean adults aged 50 years or older and the higher diagnosis rates in women who were beneficiaries of a national screening program: the Korea National Health and Nutrition Examination Survey 2008–2009. J Bone Miner Res. 2012;27(9):1879–86.CrossRef
9.
Zurück zum Zitat US Preventive Services Task Force, Curry SJ, Krist AH, et al. Screening for osteoporosis to prevent fractures: US preventive services task force recommendation statement. JAMA. 2018;319(24):2521–31.CrossRef US Preventive Services Task Force, Curry SJ, Krist AH, et al. Screening for osteoporosis to prevent fractures: US preventive services task force recommendation statement. JAMA. 2018;319(24):2521–31.CrossRef
10.
Zurück zum Zitat Brown C. Osteoporosis: staying strong. Nature. 2017;550(7674):S15–7.CrossRef Brown C. Osteoporosis: staying strong. Nature. 2017;550(7674):S15–7.CrossRef
11.
Zurück zum Zitat Lee CH, Chung CK, Kim CH, et al. Health care burden of spinal diseases in the Republic of Korea: analysis of a nationwide database from 2012 through 2016. Neurospine. 2018;15(1):66–76.CrossRef Lee CH, Chung CK, Kim CH, et al. Health care burden of spinal diseases in the Republic of Korea: analysis of a nationwide database from 2012 through 2016. Neurospine. 2018;15(1):66–76.CrossRef
12.
Zurück zum Zitat Tannor AY. Lumbar spine X-Ray as a standard investigation for all low back pain in Ghana: is it evidence based? Ghana Med J. 2017;51(1):24–9.CrossRef Tannor AY. Lumbar spine X-Ray as a standard investigation for all low back pain in Ghana: is it evidence based? Ghana Med J. 2017;51(1):24–9.CrossRef
13.
Zurück zum Zitat Lee C, Choe EK, Choi JM, et al. Health and prevention enhancement (H-PEACE): a retrospective, population-based cohort study conducted at the Seoul national university hospital Gangnam center. Korea BMJ Open. 2018;8(4):e019327.CrossRef Lee C, Choe EK, Choi JM, et al. Health and prevention enhancement (H-PEACE): a retrospective, population-based cohort study conducted at the Seoul national university hospital Gangnam center. Korea BMJ Open. 2018;8(4):e019327.CrossRef
14.
Zurück zum Zitat Kanis JA. Assessment of fracture risk and its application to screening for postmenopausal osteoporosis: synopsis of a WHO report. WHO Study Group Osteoporos Int. 1994;4(6):368–81.CrossRef Kanis JA. Assessment of fracture risk and its application to screening for postmenopausal osteoporosis: synopsis of a WHO report. WHO Study Group Osteoporos Int. 1994;4(6):368–81.CrossRef
15.
Zurück zum Zitat Krizhevsky A, Sutskever I, Hinton GE. ImageNet classification with deep convolutional neural networks. In: NIPS’12 proceedings of the 25th international conference on neural information processing systems. New York, NY: ACM; 2012. p. 1097–105. Krizhevsky A, Sutskever I, Hinton GE. ImageNet classification with deep convolutional neural networks. In: NIPS’12 proceedings of the 25th international conference on neural information processing systems. New York, NY: ACM; 2012. p. 1097–105.
16.
Zurück zum Zitat Simonyan K, Zisserman A. Very deep convolutional networks for large-scale image recognition. In: The 3rd international conference on learning representations 2015 (ICLR2015). San Diego, CA, USA; 2015. p. 1–14. Simonyan K, Zisserman A. Very deep convolutional networks for large-scale image recognition. In: The 3rd international conference on learning representations 2015 (ICLR2015). San Diego, CA, USA; 2015. p. 1–14.
17.
Zurück zum Zitat Szegedy C, Liu W, Jia Y, et al. Going deeper with convolutions. In: IEEE conference on computer vision and pattern recognition. Boston, MA: IEEE; 2015. p. 1–9. Szegedy C, Liu W, Jia Y, et al. Going deeper with convolutions. In: IEEE conference on computer vision and pattern recognition. Boston, MA: IEEE; 2015. p. 1–9.
18.
Zurück zum Zitat Szegedy C, Vanhoucke V, Ioffe S, Shlens J. Rethinking the inception architecture for computer vision. In: 2016 conference on Computer Vision and Pattern Recognition (CVPR). Las Vegas, NV, USA; 2016. p. 2818–26. Szegedy C, Vanhoucke V, Ioffe S, Shlens J. Rethinking the inception architecture for computer vision. In: 2016 conference on Computer Vision and Pattern Recognition (CVPR). Las Vegas, NV, USA; 2016. p. 2818–26.
19.
Zurück zum Zitat He K, Zhang X, Ren S, Sun J. Deep residual learning for image recognition. In: 2016 IEEE conference on Computer Vision and Pattern Recognition (CVPR). Las Vegas, NV: IEEE; 2016. p. 770–8.CrossRef He K, Zhang X, Ren S, Sun J. Deep residual learning for image recognition. In: 2016 IEEE conference on Computer Vision and Pattern Recognition (CVPR). Las Vegas, NV: IEEE; 2016. p. 770–8.CrossRef
20.
Zurück zum Zitat Jorrissen RN, Gilson MK. Virtual screening of molecular databases using a support vector machine. J Chem Inf Model. 2005;45(3):549–61.CrossRef Jorrissen RN, Gilson MK. Virtual screening of molecular databases using a support vector machine. J Chem Inf Model. 2005;45(3):549–61.CrossRef
21.
Zurück zum Zitat Wu X, Kumar V, Quinlan JR, et al. Top 10 algorithms in data mining. Knowl Inf Syst. 2008;14(1):1–37.CrossRef Wu X, Kumar V, Quinlan JR, et al. Top 10 algorithms in data mining. Knowl Inf Syst. 2008;14(1):1–37.CrossRef
22.
Zurück zum Zitat Plewczynski D, von Grotthuss M, Rychlewski L, Ginalski K. Virtual high throughput screening using combined random forest and flexible docking. Comb Chem High Throughput Screen. 2009;12(5):484–9.CrossRef Plewczynski D, von Grotthuss M, Rychlewski L, Ginalski K. Virtual high throughput screening using combined random forest and flexible docking. Comb Chem High Throughput Screen. 2009;12(5):484–9.CrossRef
23.
Zurück zum Zitat Ho TK. Random decision forests. In: Proceedings of 3rd international conference on document analysis and recognition. Montreal, Quebec: IEEE; 1995. p. 278–82. Ho TK. Random decision forests. In: Proceedings of 3rd international conference on document analysis and recognition. Montreal, Quebec: IEEE; 1995. p. 278–82.
24.
Zurück zum Zitat Ho TK. The random subspace method for constructing decision forests. IEEE Trans Pattern Anal Mach Intell. 1998;20(8):832–44.CrossRef Ho TK. The random subspace method for constructing decision forests. IEEE Trans Pattern Anal Mach Intell. 1998;20(8):832–44.CrossRef
25.
Zurück zum Zitat Menze BH, Kelm BM, Masuch R, et al. A comparison of random forest and its gini importance with standard chemometric methods for the feature selection and classification of spectral data. BMC Bioinformatics. 2009;10:213.CrossRef Menze BH, Kelm BM, Masuch R, et al. A comparison of random forest and its gini importance with standard chemometric methods for the feature selection and classification of spectral data. BMC Bioinformatics. 2009;10:213.CrossRef
26.
Zurück zum Zitat Calle ML, Urrea V, Boulesteix AL, Malats N. AUC-RF: a new strategy for genomic profiling with random forest. Hum Hered. 2011;72(2):121–32.CrossRef Calle ML, Urrea V, Boulesteix AL, Malats N. AUC-RF: a new strategy for genomic profiling with random forest. Hum Hered. 2011;72(2):121–32.CrossRef
27.
Zurück zum Zitat Chen X, Wang MH, Zhang HP. The use of classification trees for bioinformatics. Wiley Interdiscip Rev Data Min Knowl Discov. 2011;1(1):55–63.CrossRef Chen X, Wang MH, Zhang HP. The use of classification trees for bioinformatics. Wiley Interdiscip Rev Data Min Knowl Discov. 2011;1(1):55–63.CrossRef
28.
Zurück zum Zitat Casanova R, Saldana S, Chew EY, Danis RP, Greven CM, Ambrosius WT. Application of random forests methods to diabetic retinopathy classification analyses. PLoS One. 2014;9(6):e98587.CrossRef Casanova R, Saldana S, Chew EY, Danis RP, Greven CM, Ambrosius WT. Application of random forests methods to diabetic retinopathy classification analyses. PLoS One. 2014;9(6):e98587.CrossRef
29.
Zurück zum Zitat Kahn S, Rahmani H, Shah SAA, Bennamoun M, Medioni G, Dickinson S. A guide to convolutional neural networks for computer vision. In: Medioni G, Dickinson S, editors. Synthesis lectures on computer vision. San Rafael, California: Morgan & Claypool; 2018. p. 104. Kahn S, Rahmani H, Shah SAA, Bennamoun M, Medioni G, Dickinson S. A guide to convolutional neural networks for computer vision. In: Medioni G, Dickinson S, editors. Synthesis lectures on computer vision. San Rafael, California: Morgan & Claypool; 2018. p. 104.
30.
Zurück zum Zitat Lim HK, Ha HI, Park SY, Lee K. Comparison of the diagnostic performance of CT hounsfield unit histogram analysis and dual-energy X-ray absorptiometry in predicting osteoporosis of the femur. Eur Radiol. 2019;29(4):1831–40.CrossRef Lim HK, Ha HI, Park SY, Lee K. Comparison of the diagnostic performance of CT hounsfield unit histogram analysis and dual-energy X-ray absorptiometry in predicting osteoporosis of the femur. Eur Radiol. 2019;29(4):1831–40.CrossRef
32.
Zurück zum Zitat Yu TY, Cho H, Kim TY, et al. Utilization of osteoporosis-related health services: use of data from the Korean National Health Insurance Database 2008-2012. J Korean Med Sci. 2018;33(3):e20.CrossRef Yu TY, Cho H, Kim TY, et al. Utilization of osteoporosis-related health services: use of data from the Korean National Health Insurance Database 2008-2012. J Korean Med Sci. 2018;33(3):e20.CrossRef
Metadaten
Titel
The exploration of feature extraction and machine learning for predicting bone density from simple spine X-ray images in a Korean population
verfasst von
Sangwoo Lee
Eun Kyung Choe
Hae Yeon Kang
Ji Won Yoon
Hua Sun Kim
Publikationsdatum
23.11.2019
Verlag
Springer Berlin Heidelberg
Erschienen in
Skeletal Radiology / Ausgabe 4/2020
Print ISSN: 0364-2348
Elektronische ISSN: 1432-2161
DOI
https://doi.org/10.1007/s00256-019-03342-6

Weitere Artikel der Ausgabe 4/2020

Skeletal Radiology 4/2020 Zur Ausgabe

Darf man die Behandlung eines Neonazis ablehnen?

08.05.2024 Gesellschaft Nachrichten

In einer Leseranfrage in der Zeitschrift Journal of the American Academy of Dermatology möchte ein anonymer Dermatologe bzw. eine anonyme Dermatologin wissen, ob er oder sie einen Patienten behandeln muss, der eine rassistische Tätowierung trägt.

Ein Drittel der jungen Ärztinnen und Ärzte erwägt abzuwandern

07.05.2024 Klinik aktuell Nachrichten

Extreme Arbeitsverdichtung und kaum Supervision: Dr. Andrea Martini, Sprecherin des Bündnisses Junge Ärztinnen und Ärzte (BJÄ) über den Frust des ärztlichen Nachwuchses und die Vorteile des Rucksack-Modells.

Endlich: Zi zeigt, mit welchen PVS Praxen zufrieden sind

IT für Ärzte Nachrichten

Darauf haben viele Praxen gewartet: Das Zi hat eine Liste von Praxisverwaltungssystemen veröffentlicht, die von Nutzern positiv bewertet werden. Eine gute Grundlage für wechselwillige Ärztinnen und Psychotherapeuten.

Akuter Schwindel: Wann lohnt sich eine MRT?

28.04.2024 Schwindel Nachrichten

Akuter Schwindel stellt oft eine diagnostische Herausforderung dar. Wie nützlich dabei eine MRT ist, hat eine Studie aus Finnland untersucht. Immerhin einer von sechs Patienten wurde mit akutem ischämischem Schlaganfall diagnostiziert.

Update Radiologie

Bestellen Sie unseren Fach-Newsletter und bleiben Sie gut informiert.