Skip to main content
Erschienen in: Journal of Digital Imaging 4/2020

21.04.2020 | Original Paper

A Hybrid Reporting Platform for Extended RadLex Coding Combining Structured Reporting Templates and Natural Language Processing

verfasst von: Florian Jungmann, G. Arnhold, B. Kämpgen, T. Jorg, C. Düber, P. Mildenberger, R. Kloeckner

Erschienen in: Journal of Imaging Informatics in Medicine | Ausgabe 4/2020

Einloggen, um Zugang zu erhalten

Abstract

Structured reporting is a favorable and sustainable form of reporting in radiology. Among its advantages are better presentation, clearer nomenclature, and higher quality. By using MRRT-compliant templates, the content of the categorized items (e.g., select fields) can be automatically stored in a database, which allows further research and quality analytics based on established ontologies like RadLex® linked to the items. Additionally, it is relevant to provide free-text input for descriptions of findings and impressions in complex imaging studies or for the information included with the clinical referral. So far, however, this unstructured content cannot be categorized. We developed a solution to analyze and code these free-text parts of the templates in our MRRT-compliant reporting platform, using natural language processing (NLP) with RadLex® terms in addition to the already categorized items. The established hybrid reporting concept is working successfully. The NLP tool provides RadLex® codes with modifiers (affirmed, speculated, negated). Radiologists can confirm or reject codes provided by NLP before finalizing the structured report. Furthermore, users can suggest RadLex® codes from free text that is not correctly coded with NLP or can suggest to change the modifier. Analyzing free-text fields took 1.23 s on average. Hybrid reporting enables coding of free-text information in our MRRT-compliant templates and thus increases the amount of categorized data that can be stored in the database. This enhances the possibilities for further analyses, such as correlating clinical information with radiological findings or storing high-quality structured information for machine-learning approaches.
Literatur
1.
Zurück zum Zitat Brady AP: Radiology reporting-from Hemingway to HAL? Insights Imaging 9(2):237–46, 2018CrossRef Brady AP: Radiology reporting-from Hemingway to HAL? Insights Imaging 9(2):237–46, 2018CrossRef
2.
Zurück zum Zitat Lee B, Whitehead MT: Radiology Reports: What YOU Think You’re Saying and What THEY Think You’re Saying. Curr Probl Diagn Radiol 46(3):186–95, 2017 Lee B, Whitehead MT: Radiology Reports: What YOU Think You’re Saying and What THEY Think You’re Saying. Curr Probl Diagn Radiol 46(3):186–95, 2017
3.
Zurück zum Zitat European Society of Radiology: ESR paper on structured reporting in radiology. Insights Imaging 9(1):1–7, 2018CrossRef European Society of Radiology: ESR paper on structured reporting in radiology. Insights Imaging 9(1):1–7, 2018CrossRef
4.
Zurück zum Zitat Gassenmaier S, Armbruster M, Haasters F, Helfen T, Henzler T, Alibek S, Pförringer D, Sommer WH, Sommer NN: Structured reporting of MRI of the shoulder – improvement of report quality? Eur Radiol 27(10):4110–9, 2017CrossRef Gassenmaier S, Armbruster M, Haasters F, Helfen T, Henzler T, Alibek S, Pförringer D, Sommer WH, Sommer NN: Structured reporting of MRI of the shoulder – improvement of report quality? Eur Radiol 27(10):4110–9, 2017CrossRef
5.
Zurück zum Zitat Schoeppe F, Sommer WH, Nörenberg D, Verbeek M, Bogner C, Westphalen CB Dreyling M, Rummeny EJ, Fingerle AA: Structured reporting adds clinical value in primary CT staging of diffuse large B-cell lymphoma. Eur Radiol 28(9):3702–9, 2018CrossRef Schoeppe F, Sommer WH, Nörenberg D, Verbeek M, Bogner C, Westphalen CB Dreyling M, Rummeny EJ, Fingerle AA: Structured reporting adds clinical value in primary CT staging of diffuse large B-cell lymphoma. Eur Radiol 28(9):3702–9, 2018CrossRef
6.
Zurück zum Zitat Wetterauer C, Winkel DJ, Federer-Gsponer JR, Halla A, Subotic S, Deckart A, Seifert HH, Boll DT, Ebbing J: Structured reporting of prostate magnetic resonance imaging has the potential to improve interdisciplinary communication. PLoS One 14(2):e0212444, 2019CrossRef Wetterauer C, Winkel DJ, Federer-Gsponer JR, Halla A, Subotic S, Deckart A, Seifert HH, Boll DT, Ebbing J: Structured reporting of prostate magnetic resonance imaging has the potential to improve interdisciplinary communication. PLoS One 14(2):e0212444, 2019CrossRef
7.
Zurück zum Zitat Brook OR, Brook A, Vollmer CM, Kent TS, Sacnhez N, Pedrosa I: Structured Reporting of Multiphasic CT for Pancreatic Cancer: Potential Effect on Staging and Surgical Planning. Radiology 274:464–72, 2015CrossRef Brook OR, Brook A, Vollmer CM, Kent TS, Sacnhez N, Pedrosa I: Structured Reporting of Multiphasic CT for Pancreatic Cancer: Potential Effect on Staging and Surgical Planning. Radiology 274:464–72, 2015CrossRef
8.
Zurück zum Zitat Folio LR, Nelson CJ, Benjamin M, Ran A, Engelhard G, Bluemke DA: Quantitative Radiology Reporting in Oncology: Survey of Oncologists and Radiologists. AJR Am J Roentgenol 205(3):W233–43, 2015CrossRef Folio LR, Nelson CJ, Benjamin M, Ran A, Engelhard G, Bluemke DA: Quantitative Radiology Reporting in Oncology: Survey of Oncologists and Radiologists. AJR Am J Roentgenol 205(3):W233–43, 2015CrossRef
9.
Zurück zum Zitat Sobez LM, Kim SH, Angstwurm M, Stormann S, Pforringer D, Schmidutz F, Prezzi D, Kelly-Morland C, Sommer WH, Sabel B, Nörenberg D: Creating high-quality radiology reports in foreign languages through multilingual structured reporting. Eur Radiol https://doi.org/10.1007/s00330-019-06206-8. 2019 Sobez LM, Kim SH, Angstwurm M, Stormann S, Pforringer D, Schmidutz F, Prezzi D, Kelly-Morland C, Sommer WH, Sabel B, Nörenberg D: Creating high-quality radiology reports in foreign languages through multilingual structured reporting. Eur Radiol https://​doi.​org/​10.​1007/​s00330-019-06206-8. 2019
10.
Zurück zum Zitat Pinto Dos Santos D, Scheibl S, Arnhold G, Maehringer-Kunz A, Düber C, Mildenberger P, Kloeckner R: A proof of concept for epidemiological research using structured reporting with pulmonary embolism as a use case. Br J Radiol doi https://doi.org/10.1259/bjr.20170564. 2018 Pinto Dos Santos D, Scheibl S, Arnhold G, Maehringer-Kunz A, Düber C, Mildenberger P, Kloeckner R: A proof of concept for epidemiological research using structured reporting with pulmonary embolism as a use case. Br J Radiol doi https://​doi.​org/​10.​1259/​bjr.​20170564. 2018
12.
Zurück zum Zitat Pinto Dos Santos D, Klos G, Kloeckner R, Oberle R, Dueber C, Mildenberger P: Development of an IHE MRRT-compliant open-source web-based reporting platform. Eur Radiol 27(1):424–30, 2017CrossRef Pinto Dos Santos D, Klos G, Kloeckner R, Oberle R, Dueber C, Mildenberger P: Development of an IHE MRRT-compliant open-source web-based reporting platform. Eur Radiol 27(1):424–30, 2017CrossRef
13.
Zurück zum Zitat Jungmann F, Kuhn S, Kampgen B: [Basics and applications of Natural Language Processing (NLP) in radiology]. Radiologe 58(8):764–8, 2018CrossRef Jungmann F, Kuhn S, Kampgen B: [Basics and applications of Natural Language Processing (NLP) in radiology]. Radiologe 58(8):764–8, 2018CrossRef
14.
Zurück zum Zitat Dutta S, Long WJ, Brown DF, Reisner AT: Automated detection using natural language processing of radiologists recommendations for additional imaging of incidental findings. Ann Emerg Med 62(2):162–9, 2013CrossRef Dutta S, Long WJ, Brown DF, Reisner AT: Automated detection using natural language processing of radiologists recommendations for additional imaging of incidental findings. Ann Emerg Med 62(2):162–9, 2013CrossRef
15.
Zurück zum Zitat Huesch MD, Cherian R, Labib S, Mahraj R: Evaluating Report Text Variation and Informativeness: Natural Language Processing of CT Chest Imaging for Pulmonary Embolism. J Am Coll Radiol 15(3):554–62, 2018CrossRef Huesch MD, Cherian R, Labib S, Mahraj R: Evaluating Report Text Variation and Informativeness: Natural Language Processing of CT Chest Imaging for Pulmonary Embolism. J Am Coll Radiol 15(3):554–62, 2018CrossRef
16.
Zurück zum Zitat Galvez JA, Pappas JM, Ahumada L, Martin JN, Simpao AF, Rehman MA, Witmer C: The use of natural language processing on pediatric diagnostic radiology reports in the electronic health record to identify deep venous thrombosis in children. J Thromb Thrombolysis 44(3):281–90, 2017CrossRef Galvez JA, Pappas JM, Ahumada L, Martin JN, Simpao AF, Rehman MA, Witmer C: The use of natural language processing on pediatric diagnostic radiology reports in the electronic health record to identify deep venous thrombosis in children. J Thromb Thrombolysis 44(3):281–90, 2017CrossRef
17.
Zurück zum Zitat Langlotz CP: RadLex: a new method for indexing online educational materials. Radiographics 26(6):1595-7, 2006CrossRef Langlotz CP: RadLex: a new method for indexing online educational materials. Radiographics 26(6):1595-7, 2006CrossRef
18.
Zurück zum Zitat Jungmann F, Kuhn S, Tsaur I, Kampgen B: Natural language processing in radiology: Neither trivial nor impossible. Radiologe 59(9):828–32, 2019 Jungmann F, Kuhn S, Tsaur I, Kampgen B: Natural language processing in radiology: Neither trivial nor impossible. Radiologe 59(9):828–32, 2019
19.
Zurück zum Zitat Pinto dos Santos D, Arnhold G, Mildenberger P, Düber C, Kloeckner R: Guidelines Regarding §16 of the German Transplantation Act - Initial Experiences with Structured Reporting. Rofo 189:1145–51, 2017 Pinto dos Santos D, Arnhold G, Mildenberger P, Düber C, Kloeckner R: Guidelines Regarding §16 of the German Transplantation Act - Initial Experiences with Structured Reporting. Rofo 189:1145–51, 2017
20.
Zurück zum Zitat Pinto Dos Santos D, Baessler B: Big data, artificial intelligence, and structured reporting. Eur Radiol Exp 2(1):42, 2018CrossRef Pinto Dos Santos D, Baessler B: Big data, artificial intelligence, and structured reporting. Eur Radiol Exp 2(1):42, 2018CrossRef
21.
Zurück zum Zitat Pinto Dos Santos D, Hempel JM, Mildenberger P, Klockner R, Persigehl T: Structured Reporting in Clinical Routine. Rofo 191(1):33–9, 2019CrossRef Pinto Dos Santos D, Hempel JM, Mildenberger P, Klockner R, Persigehl T: Structured Reporting in Clinical Routine. Rofo 191(1):33–9, 2019CrossRef
22.
Zurück zum Zitat Pinto dos Santos D, Brodehl S, Baeßler B, Arnhold G, Dratsch T, Chon SH et al.: Structured report data can be used to develop deep learning algorithms: a proof of concept in ankle radiographs. Insights Imaging 10(1):93, 2019 Pinto dos Santos D, Brodehl S, Baeßler B, Arnhold G, Dratsch T, Chon SH et al.: Structured report data can be used to develop deep learning algorithms: a proof of concept in ankle radiographs. Insights Imaging 10(1):93, 2019
24.
Zurück zum Zitat Chen PH, Zafar H, Galperin-Aizenberg M, Cook T: Integrating Natural Language Processing and Machine Learning Algorithms to Categorize Oncologic Response in Radiology Reports. J Digit Imaging 31(2):178–84, 2018CrossRef Chen PH, Zafar H, Galperin-Aizenberg M, Cook T: Integrating Natural Language Processing and Machine Learning Algorithms to Categorize Oncologic Response in Radiology Reports. J Digit Imaging 31(2):178–84, 2018CrossRef
25.
Zurück zum Zitat Fukuhara H, Ichiyanagi O, Midorikawa S, Kakizaki H, Kaneko H, Tsuchiya N: Internal validation of a scoring system to evaluate the probability of ureteral stones: The CHOKAI score. Am J Emerg Med 35(12):1859–66, 2017CrossRef Fukuhara H, Ichiyanagi O, Midorikawa S, Kakizaki H, Kaneko H, Tsuchiya N: Internal validation of a scoring system to evaluate the probability of ureteral stones: The CHOKAI score. Am J Emerg Med 35(12):1859–66, 2017CrossRef
26.
Zurück zum Zitat Wang RC, Rodriguez RM, Moghadassi M, Noble V, Bailitz J, Mallin M, Corbo J, Kang TL, Chu P, Shiboski S, Smith-Bindman R: External Validation of the STONE Score, a Clinical Prediction Rule for Ureteral Stone: An Observational Multi-institutional Study. Ann Emerg Med 67(4):423–32 e2, 2016CrossRef Wang RC, Rodriguez RM, Moghadassi M, Noble V, Bailitz J, Mallin M, Corbo J, Kang TL, Chu P, Shiboski S, Smith-Bindman R: External Validation of the STONE Score, a Clinical Prediction Rule for Ureteral Stone: An Observational Multi-institutional Study. Ann Emerg Med 67(4):423–32 e2, 2016CrossRef
27.
Zurück zum Zitat Rizzo S, Botta F, Raimondi S, Origgi D, Fanciullo C, Morganti AG, Bellomi M. Radiomics: the facts and the challenges of image analysis. Eur Radiol Exp 2(1):36, 2018CrossRef Rizzo S, Botta F, Raimondi S, Origgi D, Fanciullo C, Morganti AG, Bellomi M. Radiomics: the facts and the challenges of image analysis. Eur Radiol Exp 2(1):36, 2018CrossRef
28.
Zurück zum Zitat Lambin P, Leijenaar RTH, Deist TM, Peerlings J, de Jong EEC, van Timmeren J, Sanduleanu RTHM, Even AJG, Jochems A, van Wijk Y, Woodruff H, van Soest J, Lustberg T, Roelofs E, van Elmpt W, Dekker A, Mottaghy FM, Wildberger JE, Walsh S: Radiomics: the bridge between medical imaging and personalized medicine. Nat Rev Clin Oncol 14(12):749–62, 2017CrossRef Lambin P, Leijenaar RTH, Deist TM, Peerlings J, de Jong EEC, van Timmeren J, Sanduleanu RTHM, Even AJG, Jochems A, van Wijk Y, Woodruff H, van Soest J, Lustberg T, Roelofs E, van Elmpt W, Dekker A, Mottaghy FM, Wildberger JE, Walsh S: Radiomics: the bridge between medical imaging and personalized medicine. Nat Rev Clin Oncol 14(12):749–62, 2017CrossRef
29.
Zurück zum Zitat Folio LR, Machado LB, Dwyer AJ: Multimedia-enhanced Radiology Reports: Concept, Components, and Challenges. Radiographics 38(2):462–82, 2018CrossRef Folio LR, Machado LB, Dwyer AJ: Multimedia-enhanced Radiology Reports: Concept, Components, and Challenges. Radiographics 38(2):462–82, 2018CrossRef
Metadaten
Titel
A Hybrid Reporting Platform for Extended RadLex Coding Combining Structured Reporting Templates and Natural Language Processing
verfasst von
Florian Jungmann
G. Arnhold
B. Kämpgen
T. Jorg
C. Düber
P. Mildenberger
R. Kloeckner
Publikationsdatum
21.04.2020
Verlag
Springer International Publishing
Erschienen in
Journal of Imaging Informatics in Medicine / Ausgabe 4/2020
Print ISSN: 2948-2925
Elektronische ISSN: 2948-2933
DOI
https://doi.org/10.1007/s10278-020-00342-0

Weitere Artikel der Ausgabe 4/2020

Journal of Digital Imaging 4/2020 Zur Ausgabe

Akuter Schwindel: Wann lohnt sich eine MRT?

28.04.2024 Schwindel Nachrichten

Akuter Schwindel stellt oft eine diagnostische Herausforderung dar. Wie nützlich dabei eine MRT ist, hat eine Studie aus Finnland untersucht. Immerhin einer von sechs Patienten wurde mit akutem ischämischem Schlaganfall diagnostiziert.

Screening-Mammografie offenbart erhöhtes Herz-Kreislauf-Risiko

26.04.2024 Mammografie Nachrichten

Routinemäßige Mammografien helfen, Brustkrebs frühzeitig zu erkennen. Anhand der Röntgenuntersuchung lassen sich aber auch kardiovaskuläre Risikopatientinnen identifizieren. Als zuverlässiger Anhaltspunkt gilt die Verkalkung der Brustarterien.

S3-Leitlinie zu Pankreaskrebs aktualisiert

23.04.2024 Pankreaskarzinom Nachrichten

Die Empfehlungen zur Therapie des Pankreaskarzinoms wurden um zwei Off-Label-Anwendungen erweitert. Und auch im Bereich der Früherkennung gibt es Aktualisierungen.

Fünf Dinge, die im Kindernotfall besser zu unterlassen sind

18.04.2024 Pädiatrische Notfallmedizin Nachrichten

Im Choosing-Wisely-Programm, das für die deutsche Initiative „Klug entscheiden“ Pate gestanden hat, sind erstmals Empfehlungen zum Umgang mit Notfällen von Kindern erschienen. Fünf Dinge gilt es demnach zu vermeiden.

Update Radiologie

Bestellen Sie unseren Fach-Newsletter und bleiben Sie gut informiert.