Skip to main content
Erschienen in: Journal of Digital Imaging 2/2020

10.10.2019 | Original Paper

Automatic Lumbar Spine Tracking Based on Siamese Convolutional Network

verfasst von: Yuan Liu, Xiubao Sui, Chengwei Liu, Xiaodong Kuang, Yong Hu

Erschienen in: Journal of Imaging Informatics in Medicine | Ausgabe 2/2020

Einloggen, um Zugang zu erhalten

Abstract

Deep learning has demonstrated great success in various computer vision tasks. However, tracking the lumbar spine by digitalized video fluoroscopic imaging (DVFI), which can quantitatively analyze the motion mode of the spine to diagnose lumbar instability, has not yet been well developed due to the lack of steady and robust tracking method. The aim of this work is to automatically track lumbar vertebras with rotated bounding boxes in DVFI sequences. Instead of distinguishing vertebras using annotated lumbar images or sequences, we train a full-convolutional siamese neural network offline to learn generic image features with transfer learning. The siamese network is trained to learn a similarity function that compares the labeled target from the initial frame with the candidate patches from the current frame. The similarity function returns a high score if the two images depict the same object. Once learned, the similarity function is used to track a previously unseen object without any adapting online. Our tracker is performed by evaluating the candidate rotated patches sampled around the previous target’s position and presents rotated bounding boxes to locate the lumbar spine from L1 to L4. Results indicate that the proposed tracking method can track the lumbar vertebra steadily and robustly. The study demonstrates that the lumbar tracker based on siamese convolutional network can be trained successfully without annotated lumbar sequences.
Literatur
1.
Zurück zum Zitat Landi A, Gregori F, Marotta N, Donnarumma P, Delfini R: Hidden spondylolisthesis: unrecognized cause of low back pain? Prospective study about the use of dynamic projections in standing and recumbent position for the individuation of lumbar instability. Neuroradiology 57(6):583–588, 2015CrossRef Landi A, Gregori F, Marotta N, Donnarumma P, Delfini R: Hidden spondylolisthesis: unrecognized cause of low back pain? Prospective study about the use of dynamic projections in standing and recumbent position for the individuation of lumbar instability. Neuroradiology 57(6):583–588, 2015CrossRef
2.
Zurück zum Zitat Ahn K, Jhun HJ: New physical examination tests for lumbar spondylolisthesis and instability: low midline sill sign and interspinous gap change during lumbar flexion-extension motion. BMC musculoskeletal disorders 16(1):97–103, 2015CrossRef Ahn K, Jhun HJ: New physical examination tests for lumbar spondylolisthesis and instability: low midline sill sign and interspinous gap change during lumbar flexion-extension motion. BMC musculoskeletal disorders 16(1):97–103, 2015CrossRef
3.
Zurück zum Zitat Patriarca L, Letteriello M, Di Cesare E, Barile A, Gallucci M, Splendiani A: Does evaluator experience have an impact on the diagnosis of lumbar spine instability in dynamic MRI Interobserver agreement study. Neuroradiol 28(3):341–346, 2015CrossRef Patriarca L, Letteriello M, Di Cesare E, Barile A, Gallucci M, Splendiani A: Does evaluator experience have an impact on the diagnosis of lumbar spine instability in dynamic MRI Interobserver agreement study. Neuroradiol 28(3):341–346, 2015CrossRef
4.
Zurück zum Zitat Sui F, Zhang D, Lam SCB, Zhao L, Wang D, Bi Z, Hu Y: Auto-tracking system for human lumbar motion analysis. Journal of X-ray Science and Technology 19(2):205–218, 2011CrossRef Sui F, Zhang D, Lam SCB, Zhao L, Wang D, Bi Z, Hu Y: Auto-tracking system for human lumbar motion analysis. Journal of X-ray Science and Technology 19(2):205–218, 2011CrossRef
5.
Zurück zum Zitat Clarke MJ, Zadnik PL, Groves ML, Sciubba DM, Witham TF, Bydon A, Wolinsky JP: Fusion following lateral mass reconstruction in the cervical spine. Journal of Neurosurgery: Spine 22(2):139–150, 2015PubMed Clarke MJ, Zadnik PL, Groves ML, Sciubba DM, Witham TF, Bydon A, Wolinsky JP: Fusion following lateral mass reconstruction in the cervical spine. Journal of Neurosurgery: Spine 22(2):139–150, 2015PubMed
6.
Zurück zum Zitat Kettler A, Rohlmann F, Ring C, Mack C, Wilke HJ: Do early stages of lumbar intervertebral disc degeneration really cause instability? Evaluation of an in vitro database. European Spine Journal 20(4):578–584, 2011CrossRef Kettler A, Rohlmann F, Ring C, Mack C, Wilke HJ: Do early stages of lumbar intervertebral disc degeneration really cause instability? Evaluation of an in vitro database. European Spine Journal 20(4):578–584, 2011CrossRef
7.
Zurück zum Zitat Miyasaka K, Ohmori K, Suzuki K, Inoue H: Radiographic analysis of lumbar motion in relation to lumbosacral stability: investigation of moderate and maximum motion. SPINE 25(6):732–737, 2000CrossRef Miyasaka K, Ohmori K, Suzuki K, Inoue H: Radiographic analysis of lumbar motion in relation to lumbosacral stability: investigation of moderate and maximum motion. SPINE 25(6):732–737, 2000CrossRef
8.
Zurück zum Zitat Bertinetto L, Valmadre J, Henriques J F, et al. Fully-Convolutional Siamese Networks for Object Tracking. European Conference on Computer Vision – ECCV2016, 2016:850–865. Bertinetto L, Valmadre J, Henriques J F, et al. Fully-Convolutional Siamese Networks for Object Tracking. European Conference on Computer Vision – ECCV2016, 2016:850–865.
9.
Zurück zum Zitat Kumar VP, Thomas T: Automatic estimation of orientation and position of spine in digitized X-rays using mathematical morphology. Journal of Digital Imaging 18(3):234–241, 2005CrossRef Kumar VP, Thomas T: Automatic estimation of orientation and position of spine in digitized X-rays using mathematical morphology. Journal of Digital Imaging 18(3):234–241, 2005CrossRef
10.
Zurück zum Zitat Benjelloun M, Mahmoudi S: Spine localization in X-ray images using interest point detection. Journal of Digital Imaging 22(3):309–318, 2009CrossRef Benjelloun M, Mahmoudi S: Spine localization in X-ray images using interest point detection. Journal of Digital Imaging 22(3):309–318, 2009CrossRef
11.
Zurück zum Zitat Liu Y, Sui X, Sun Y, Liu C, Hu Y: Siamese convolutional networks for tracking the spine motion. In Applications of Digital Image Processing XL. International Society for Optics and Photonics 10396(103961Y), 2017 Liu Y, Sui X, Sun Y, Liu C, Hu Y: Siamese convolutional networks for tracking the spine motion. In Applications of Digital Image Processing XL. International Society for Optics and Photonics 10396(103961Y), 2017
12.
Zurück zum Zitat Zhou Y, Liu Y, Chen Q, Gu G, and Sui X. Automatic Lumbar MRI Detection and Identification Based on Deep Learning. Journal of digital imaging, 32:513, 2019, 520 Zhou Y, Liu Y, Chen Q, Gu G, and Sui X. Automatic Lumbar MRI Detection and Identification Based on Deep Learning. Journal of digital imaging, 32:513, 2019, 520
13.
Zurück zum Zitat SMMR AA, Knapp K, Slabaugh G: Fully automatic cervical vertebrae segmentation framework for X-ray images. Computer Methods & Programs in Biomedicine 157:95–111, 2018CrossRef SMMR AA, Knapp K, Slabaugh G: Fully automatic cervical vertebrae segmentation framework for X-ray images. Computer Methods & Programs in Biomedicine 157:95–111, 2018CrossRef
14.
Zurück zum Zitat Wang N, Yeung DY: Learning a deep compact image representation for visual tracking. In Advances in Neural Information Processing Systems:809–817, 2013 Wang N, Yeung DY: Learning a deep compact image representation for visual tracking. In Advances in Neural Information Processing Systems:809–817, 2013
15.
Zurück zum Zitat Gao J, Ling H, Hu W, and Xing J. Transfer learning based visual tracking with gaussian processes regression. In ECCV. 188–203. (2014). Gao J, Ling H, Hu W, and Xing J. Transfer learning based visual tracking with gaussian processes regression. In ECCV. 188–203. (2014).
16.
Zurück zum Zitat Liu Y, Sui X, Kuang X, Liu C, Gu G, Chen Q: Object Tracking Based on Vector Convolutional Network and Discriminant Correlation Filters. Sensors 19(8):2019, 1818 Liu Y, Sui X, Kuang X, Liu C, Gu G, Chen Q: Object Tracking Based on Vector Convolutional Network and Discriminant Correlation Filters. Sensors 19(8):2019, 1818
17.
Zurück zum Zitat Irshad M, Muhammad N, Sharif M, Yasmeen M: Automatic segmentation of the left ventricle in a cardiac MR short axis image using blind morphological operation. The European Physical Journal Plus 133(4):148, 2018CrossRef Irshad M, Muhammad N, Sharif M, Yasmeen M: Automatic segmentation of the left ventricle in a cardiac MR short axis image using blind morphological operation. The European Physical Journal Plus 133(4):148, 2018CrossRef
18.
Zurück zum Zitat Kim K, Lee S: Vertebrae localization in CT using both local and global symmetry features. Comput Med Imaging Graph 58:45–55, 2017CrossRef Kim K, Lee S: Vertebrae localization in CT using both local and global symmetry features. Comput Med Imaging Graph 58:45–55, 2017CrossRef
19.
Zurück zum Zitat Han Z, Wei B, Leung S et al.: Automated Pathogenesis-Based Diagnosis of Lumbar Neural Foraminal Stenosis via Deep Multiscale Multitask Learning. Neuro informatics 1:1–13, 2018 Han Z, Wei B, Leung S et al.: Automated Pathogenesis-Based Diagnosis of Lumbar Neural Foraminal Stenosis via Deep Multiscale Multitask Learning. Neuro informatics 1:1–13, 2018
20.
Zurück zum Zitat Wang J, Fang Z, Lang N, Yuan H, Su MY, Baldi P: A multi-resolution approach for spinal metastasis detection using deep Siamese neural networks. Computers in Biology & Medicine 84(C):137–146, 2017CrossRef Wang J, Fang Z, Lang N, Yuan H, Su MY, Baldi P: A multi-resolution approach for spinal metastasis detection using deep Siamese neural networks. Computers in Biology & Medicine 84(C):137–146, 2017CrossRef
21.
Zurück zum Zitat Forsberg D, Sjöblom E, Sunshine JL: Detection and Labeling of Vertebrae in MR Images Using Deep Learning with Clinical Annotations as Training Data. Journal of Digital Imaging 30(4):1–7, 2017CrossRef Forsberg D, Sjöblom E, Sunshine JL: Detection and Labeling of Vertebrae in MR Images Using Deep Learning with Clinical Annotations as Training Data. Journal of Digital Imaging 30(4):1–7, 2017CrossRef
22.
Zurück zum Zitat Krizhevsky A, Sutskever I, Hinton GE: ImageNet classification with deep convolutional neural networks. International Conference on Neural Information Processing Systems. Curran Associates Inc 60(2):1097–1105, 2012 Krizhevsky A, Sutskever I, Hinton GE: ImageNet classification with deep convolutional neural networks. International Conference on Neural Information Processing Systems. Curran Associates Inc 60(2):1097–1105, 2012
23.
Zurück zum Zitat Girshick R, Donahue J, Darrell T and Malik J. Rich feature hierarchies for accurate object detection and semantic segmentation. In CVPR, (2014).CrossRef Girshick R, Donahue J, Darrell T and Malik J. Rich feature hierarchies for accurate object detection and semantic segmentation. In CVPR, (2014).CrossRef
24.
Zurück zum Zitat Russakovsky O, Deng J, Su H, Krause J, Satheesh S, Ma S, Huang Z, Karpathy A, Khosla A, Bernstein M, Berg A C, Fei-Fei L. ImageNet Large Scale Visual Recognition Challenge. IJCV (2015). Russakovsky O, Deng J, Su H, Krause J, Satheesh S, Ma S, Huang Z, Karpathy A, Khosla A, Bernstein M, Berg A C, Fei-Fei L. ImageNet Large Scale Visual Recognition Challenge. IJCV (2015).
25.
Zurück zum Zitat Oktay AB, Akgul YS: Simultaneous Localization of Lumbar Vertebrae and Intervertebral Discs With SVM-Based MRF. IEEE Trans Biomed Eng 60(9):2375–2383, 2013CrossRef Oktay AB, Akgul YS: Simultaneous Localization of Lumbar Vertebrae and Intervertebral Discs With SVM-Based MRF. IEEE Trans Biomed Eng 60(9):2375–2383, 2013CrossRef
26.
Zurück zum Zitat Vedaldi, A. and Lenc, K., “Matconvnet: Convolutional neural networks for matlab,” Proc. ACM International Conference on Multimedia, (2015). Vedaldi, A. and Lenc, K., “Matconvnet: Convolutional neural networks for matlab,” Proc. ACM International Conference on Multimedia, (2015).
Metadaten
Titel
Automatic Lumbar Spine Tracking Based on Siamese Convolutional Network
verfasst von
Yuan Liu
Xiubao Sui
Chengwei Liu
Xiaodong Kuang
Yong Hu
Publikationsdatum
10.10.2019
Verlag
Springer International Publishing
Erschienen in
Journal of Imaging Informatics in Medicine / Ausgabe 2/2020
Print ISSN: 2948-2925
Elektronische ISSN: 2948-2933
DOI
https://doi.org/10.1007/s10278-019-00273-5

Weitere Artikel der Ausgabe 2/2020

Journal of Digital Imaging 2/2020 Zur Ausgabe

Screening-Mammografie offenbart erhöhtes Herz-Kreislauf-Risiko

26.04.2024 Mammografie Nachrichten

Routinemäßige Mammografien helfen, Brustkrebs frühzeitig zu erkennen. Anhand der Röntgenuntersuchung lassen sich aber auch kardiovaskuläre Risikopatientinnen identifizieren. Als zuverlässiger Anhaltspunkt gilt die Verkalkung der Brustarterien.

S3-Leitlinie zu Pankreaskrebs aktualisiert

23.04.2024 Pankreaskarzinom Nachrichten

Die Empfehlungen zur Therapie des Pankreaskarzinoms wurden um zwei Off-Label-Anwendungen erweitert. Und auch im Bereich der Früherkennung gibt es Aktualisierungen.

Fünf Dinge, die im Kindernotfall besser zu unterlassen sind

18.04.2024 Pädiatrische Notfallmedizin Nachrichten

Im Choosing-Wisely-Programm, das für die deutsche Initiative „Klug entscheiden“ Pate gestanden hat, sind erstmals Empfehlungen zum Umgang mit Notfällen von Kindern erschienen. Fünf Dinge gilt es demnach zu vermeiden.

„Nur wer sich gut aufgehoben fühlt, kann auch für Patientensicherheit sorgen“

13.04.2024 Klinik aktuell Kongressbericht

Die Teilnehmer eines Forums beim DGIM-Kongress waren sich einig: Fehler in der Medizin sind häufig in ungeeigneten Prozessen und mangelnder Kommunikation begründet. Gespräche mit Patienten und im Team können helfen.

Update Radiologie

Bestellen Sie unseren Fach-Newsletter und bleiben Sie gut informiert.