Background
Breaking of B cell tolerance and the generation of high-affinity autoantibodies play a pivotal role in the pathogenesis of autoimmune diseases, including systemic lupus erythematosus (SLE) [
1] and rheumatoid arthritis (RA) [
2]. Thus, B cell-targeting therapies have attracted great attentions in recent years. B cell depletion by rituximab has succeeded in trials on rheumatoid arthritis (RA) [
3‐
5]; however, its effects on SLE were variable [
6,
7]. Other trials to target B cell-activating factor (BAFF) by belimumab and atacicept have been performed on SLE, while only belimumab has achieved positive endpoints [
8,
9]. Attempts to arrest B cell activation such as by Bruton tyrosine kinase (Btk) inhibitor ibrutinib are still at a pre-clinical stage [
10].
Recently, targeting plasma cells by proteasome inhibitor bortezomib [
11,
12] represents a new strategy to remove long-lived plasma cells in autoimmune diseases. Actually, it is less effective for plasma cell depletion in human than in mice. In addition, long-term treatment with bortezomib or other proteasome inhibitors is not favored because of the toxicity profiles and costs [
13]. Therefore, new therapies to ablate aberrant B cell compartment with minimum side effects in autoimmune diseases are urgently warranted.
Iguratimod is a conventional synthetic disease-modifying antirheumatic drug (DMARD) approved for treating RA in northeast Asia [
14]. In a phase 3 clinical trial performed in Japan, iguratimod showed superiority over placebo and non-inferiority to salazosulfapyridine (SASP) [
15]. We have performed the phase III clinical trial in China and found that iguratimod was non-inferior to methotrexate (MTX) with fewer and milder side effects [
16]. A postmarketing surveillance (PMS) study involving more than 2000 patients for 52 weeks provided the real-world evidence that iguratimod was safe and effective in RA patients [
17]. In addition, iguratimod showed add-on efficacy in RA patients with inadequate response to methotrexate [
18], methotrexate-cyclosporin A-hydroxychloroquine-prednisone [
19] or biological DMARDs [
20,
21].
While the therapeutic benefit of iguratimod is obvious in clinics, currently its mechanism of action is still not fully clarified. Iguratimod was initially developed as a cyclooxygenase-2 (COX-2) inhibitor [
22]; however, the mechanism of action of iguratimod seems distinct from classical non-steroidal anti-inflammatory drugs (NSAIDs) [
22,
23]. Iguratimod was also shown to inhibit NF-κB translocation [
24] and suppress proinflammatory cytokine production in a variety of cell types [
24‐
26]. By contrast, a recent study indicated that iguratimod exhibited minimal suppression for several proinflammatory cytokines (TNF-alpha, MCP-1 and IL-8) in LPS-stimulated human monocytes; instead, it was identified as a macrophage migration inhibitory factor (MIF) inhibitor to exert an anti-inflammatory effect [
27]. Iguratimod was also shown to dampen IL-17 signaling by targeting Act1 [
28]. All of these studies suggest that iguratimod could play a complex role in vivo and to identify the key pathway for its action is urgently warranted.
In our phase III clinical trial of treatment of active RA with iguratimod, one striking feature closely associated with clinical improvement following iguratimod treatment in RA patients is the reduction of serum concentrations of immunoglobulins such as IgG, IgM, and IgA [
15,
16]. In RA and lupus models, iguratimod also decreased autoantibody titers, including anti-collagen [
28,
29] and anti-dsDNA [
30]. Interestingly, iguratimod seems to regulate B cell differentiation in a unique, non-antiproliferative manner. Unlike B cell depletion agent rituximab [
31,
32] or Btk inhibitor ibrutinib [
33], iguratimod reduced the peripheral ASC population without affecting other B cell compartments in MRL/lpr mice [
30]. Besides, either proliferation or apoptosis of B cells seemed not affected by iguratimod in mice or in vitro [
28,
30,
34]. In this study, we have investigated the effect of iguratimod on human B cell terminal differentiation with a purpose to reveal the key pathway targeted by this promising antirheumatic drug.
Methods
Patients and treatment
Peripheral blood samples from six new-onset RA patients who fulfilled the ACR/EULAR 2010 criteria were obtained from Renji Hospital, Shanghai, China. Buffy coats were obtained from healthy donors from Blood Center of Changhai Hospital, Shanghai, China. In the study, we also collected peripheral blood samples from six disease-modifying drug-naive RA patients every 4 weeks after receiving iguratimod monotherapy (50 mg/day) until the 12th week. Iguratimod was kindly provided by Simcere Pharmaceutical Group (Nanjing, China). Additional file
1: Table S1 summarized the baseline characteristics of the six patients. Disease activity is calculated by DAS28-CRP, DAS28-ESR, simplified disease activity index (SDAI), and CDAI. This study was approved by the Ethics Committee of Renji Hospital, Shanghai, China. Informed consent was obtained from all study participants. All studies were performed in accordance with the Declaration of Helsinki.
B cell purification and culture
Peripheral blood mononuclear cells (PBMCs) were collected by Lymphoprep (Axis-Shield) density gradient centrifugation of heparinized blood or buffy coats. Human B lymphocytes were purified from healthy donors using LS Columns and MACS Technology (Miltenyi Biotec). The purity of B cells was checked by flow cytometry (FCM), and the purity was > 95%. CD19+ cells were differentiated into plasma cell in RPMI-1640 medium (GIBCO, North Andover, MA) supplemented with 10 ng/mL IL-2 (Peprotech), 10 ng/mL IL-10 (R&D), 5 μg/ml CpG2006 (Sangon Biotech, Shanghai), 10% fetal bovine serum (FBS) (GIBCO), and antibiotics (penicillin 100 U/ml, streptomycin 100 μg/ml, Gibco BRL). In some experiments, B cells were stimulated with 10 ng/mL IL-2 (Peprotech), 50 ng/ml IL-21 (Miltenyi), and 250 ng/ml multimeric CD40L (Adipogen). To assess the effects of iguratimod on B cell terminal differentiation, B cells were incubated with various concentrations of iguratimod (1, 3, 10 μM, Simcere Pharmaceutical Group) or vehicle (DMSO, sigma) at the onset of culture. Celecoxib (COX-2 inhibitor, Sigma) was added as a control in given experiments. The cells were harvested on days 2, 3, and 5 and analyzed by FCM. Data were analyzed using FlowJo (Tree Star, USA).
Flow cytometric analysis
PBMCs were surface stained with fluorochrome-labelled antibodies against CD3 (eBioscience, SK7), CD19 (Biolegend, HIB19), CD20 (BD, 2H7), CD27 (Biolegend, O323), and CD38 (Biolegend, HIT2). Circulating ASC was identified as CD3-CD19+CD20-CD27hiCD38hi. To detect B cell activation and intracellular makers of in vitro differentiated B cells, cells were washed and then stained with Zombie Yellow™ Dye (Biolegend) to eliminate dead cells. CD69 (BD, FN50) and CD25 (Biolegend, M-A251) were used to detect B cell activation. For intracellular staining, cells were fixed, permeabilized, and stained for the detection of intracellular markers including BLIMP1 (Novus, 3h2E8), XBP1 (Biolegend, 143F), PAX5 (Biolegend, 1H9), and pSTAT3 (Y705) (eBioscience, LUVNKLA) using a Foxp3 transcription factor staining buffer kit following the manufacturer’s instructions (eBioscience).
IgG and IgM production assessment
The supernatants were harvested and tested for the concentrations of IgM and IgG by using enzyme-linked immunosorbent assay (ELISA) kits (R&D system, Minneapolis, MN, and ICL Lab) according to the manufacturer’s instructions. The absorbance was read at 450 nm on a microplate reader.
Flow cytometric analysis of B cell apoptosis and proliferation
Following 48-h culture of B cells, apoptosis was assessed with an apoptosis detection kit with Annexin V/Propidium Iodide (PI), according to the manufacturer’s instructions (eBiosciences). Proliferation was assessed by carboxyfluorescein succinimidyl ester (CFSE) (Sigma) until day 5.
Real-time quantitative polymerase chain reaction (PCR) analysis
Total RNA from B cells was isolated with TRIzol reagent (Life Technologies) on day 4 and reverse-transcribed using Sensiscript II reverse transcriptase Kit (Takara). mRNA expression of BLIMP1, XBP1, PAX5, and EGR1 were measured by SYBR Green qPCR using Premix Ex Taq (Takara). Thermocycler conditions included an initial incubation at 95 °C for 15 s. This was followed by a two-step PCR program: 95 °C for 5 s and 60 °C for 30 s for 40 cycles. Each reaction was performed in triplicate. Data were collected and quantitatively analyzed on an ABI PRISM 7900 sequence detection system (Applied Biosystems, Grand Island, NY, USA). The GAPDH gene was used as an endogenous control.
Enzyme immunoassay(EIA)for COX-2 activity
For COX-2 activity assessment, we used an ex vivo COX-2 inhibitor screening assay kit (No. 701080; Cayman Chemical, USA). In general, COX-2 catalyzes the first step in the biosynthesis of arachidonic acid to prostaglandin H2 (PGH2); then PGH2 was reduced into PGF2α with stannous chloride, which was measured by EIA. DMSO-dissolved iguratimod (1 μM to 1 nM) or celecoxib (1 μM) was applied in the first reaction of this kit.
Western blotting for EGR1
Following 0, 1, 2, and 4 days of B cell culture, proteins were extracted in lysis buffer (50 mM Tris, pH 7.4; 150 mM NaCl; 1% Triton X-100; and 1 mM EDTA, pH 8.0) supplemented with protease inhibitor complete mini (Roche) and 1 mM PMSF, 1 mM Na3VO4, and 1 mM NaF. The proteins were then separated by SDS-PAGE and electrophoretically transferred onto polyvinylidene fluoride membranes. The membranes were probed with anti-EGR1 mAb (Cell Signaling Technology) overnight at 4 °C and then incubated with an HRP-coupled secondary Ab. Detection was performed using a LumiGLO chemiluminescent substrate system.
PKC kinase activity assessment
Purified B cell were harvested on 30 min and then lysed to obtain whole cell lysate. PKC kinase activity was detected with a commercial kit (Abcam) and performed according to the manufacturer’s instructions. Measured optical density was at 450 nm.
RNA-seq analysis
Library preparation for transcriptome sequencing: all RNA-seq experiments were performed with purified B cells after 4 days of culture. Briefly, mRNA was purified from total RNA using poly-T oligo-attached magnetic beads. Fragmentation was carried out using divalent cations under elevated temperature in NEBNext First Strand Synthesis Reaction Buffer (5×). First-strand cDNA was synthesized using random hexamer primer and M-MuLV Reverse Transcriptase (RNase H). Second-strand cDNA synthesis was subsequently performed using DNA polymerase I and RNase H. Remaining overhangs were converted into blunt ends via exonuclease/polymerase activities. After adenylation of 3′ ends of DNA fragments, NEBNext Adaptor with hairpin loop structure was ligated to prepare for hybridization. In order to select cDNA fragments of preferentially 150~200 bp in length, the library fragments were purified with AMPure XP system (Beckman Coulter, Beverly, USA). Then 3 μl USER Enzyme (NEB, USA) was used with size-selected, adaptor-ligated cDNA at 37 °C for 15 min followed by 5 min at 95 °C before PCR. Then PCR was performed with Phusion High-Fidelity DNA polymerase, Universal PCR primers, and Index (X) Primer. At last, PCR products were purified (AMPure XP system) and library quality was assessed on the Agilent Bioanalyzer 2100 system.
The clustering of the index-coded samples was performed on a cBot Cluster Generation System using TruSeq PE Cluster Kit v3-cBot-HS (Illumina) according to the manufacturer’s instructions. After cluster generation, the library preparations were sequenced on an Illumina Hiseq platform and 125 bp/150 bp paired-end reads were generated.
Differential expression analysis of two groups was performed using the DESeq2 R package (1.10.1). DESeq2 provide statistical routines for determining differential expression in digital gene expression data using a model based on the negative binomial distribution. The resulting
P values were adjusted using the Benjamini and Hochberg’s approach for controlling the false discovery rate. Genes with an adjusted
P value < 0.05 found by DESeq2 were assigned as differentially expressed. Principle component analysis (PCA) was implemented with prcomp in R package. Gene Set Enrichment Analysis (GSEA) was performed using GSEA software from Broad Institute [
35].
Statistical analysis
Statistical analysis was performed with the GraphPad Prism 7 software. Statistical significance between two groups was calculated by Student’s t test or paired Student’s t test; for comparisons of more than two groups, one-way or RM one-way ANOVA with Bonferroni correction for multiple comparisons was used. P value < 0.05 was considered significant. The statistical evaluation of the RNA-seq data is described in the section dealing with the RNA-seq analysis.
Discussion
Iguratimod is a new type of DMARDs licensed to treat RA patients in China and Japan. Both clinical trials and clinical practice in large numbers of RA patients provide the convincing evidence that iguratimod is safe and effective with limited adverse effects [
15‐
17]. More importantly, iguratimod provides an additional opportunity for refractory patients to routine first-line and second-line therapies [
18‐
21]. Although the clinical benefit has been proven, the drug target of iguratimod has been controversial, which greatly limits a broader application of this drug. In this study, we uncovered a potential mechanism of iguratimod by demonstrating that iguratimod inhibited human B cell terminal differentiation via dampening PKC pathway and EGR1 expression.
The critical role of B cells and autoantibodies in the pathogenesis of RA has been well appreciated. The abnormal humoral responses indicated by rheumatoid factors (RFs) and anticitrullinated protein antibodies (ACPAs) appear long time before disease onset. Then an attack on the joints happens accompanied with relatively high titers of autoantibodies and with a spread of antibody specificities [
48] and activation of osteoclast activity [
49]. In addition, B cells reacting with citrullinated peptides were enriched in RA joints [
50], supporting a pathogenic role of these B cells locally. A reduction of serum concentrations of immunoglobulins in RA patients following iguratimod treatment suggests that regulating humoral responses is a key aspect of iguratimod [
15,
16].
The targets of iguratimod remain controversial, especially for COX-2. In the current study, we showed that targeting COX-2 is an unlike major mechanism by iguratimod in inhibiting ASC differentiation, as iguratimod exhibited a much less COX-2 inhibition activity but more potent to repress ASC generation than a typical COX-2 inhibitor celecoxib. For the other two potential candidates for iguratimod targets, NF-κB [
24] and Act1 [
28], NF-κB is unlikely to be the target in the current B cell differentiation system, as B cell survival, activation, and proliferation were not affected by iguratimod. Act1 is an adaptor of IL-17 signaling [
28] and has also shown to be a negative regulator of CD40- and BAFF-mediated B cell maturation and survival [
51,
52]. However, we did not see any significant difference for B cell maturation and survival after iguratimod treatment. Therefore, Act1, as well as NF-κB and COX-2, is not likely to explain effects of iguratimod on B cell terminal differentiation.
To look for potential targets, we applied global RNA sequencing and identified PKC pathway as a new target of iguratimod. The PKC family is broadly divided into three subgroups: classical, novel, and atypical PKCs. In B cells, PKCβ is the most highly expressed PKC member and mediates the signaling downstreams of BCR [
53,
54] and BAFF [
55]. In a recent report, PKCβ is required for germinal center formation and plasma cell differentiation [
44]. In a lupus mouse model, PKCβ deficiency or administration of a PKCβ-specific inhibitor enzastaurin drastically decreases autoantibody titers and prevents the development of the disease [
56]. These results demonstrate that PKC pathway, particularly PKCβ, plays a critical role in B cell terminal differentiation.
In addition to PKC pathway, RNA sequencing also identified
EGR1 gene was dramatically downregulated in stimulated B cells following iguratimod treatment. EGR1 is a target of PKC pathway [
45] which is a DNA-binding transcriptional regulator important for cell survival, proliferation, and death. The EGR1 binding box was previously demonstrated necessary for BLIMP1 expression [
46]. Recently in an in vivo study,
egr1−/− mice have impaired ASC differentiation yet with normal B cell development and intact cell proliferation and apoptosis [
57]. This feature is highly matching what we have observed in iguratimod-treated human B cells. Thus, our study strongly suggests that PKC/EGR1/BLIMP1 axis constitutes a most probable working mechanism for iguratimod to regulate B cell terminal differentiation.
The gene-regulatory network controlling B cell terminal differentiation is complex, and commitment to plasmacytic differentiation involves the inhibition of B cell identity TFs (such as PAX5, BACH2, BCL6 and IRF8) and the expression of the plasma cell-driving TFs (IRF4, BLIMP1 and XBP1) [
41]. Particularly, PAX5 and BLIMP1 are identified as two pivotal TFs controlling B cell identity and plasma cell differentiation, respectively, and a mutually antagonistic function of these two TFs has been proposed [
58,
59]. In addition to PAX5, BLIMP1 also represses the expression of other B cell identity TFs BCL6, AID, SPIB, and CIITA [
60,
61]; thus, an increased expression of these TFs in iguratimod-treated B cells could be linked with the decreased BLIMP1 expression following the PKC/EGR1 axis. In addition, iguratimod treatment also led to enhanced expressions of
BACH2 and
IRF8. Both BACH2 and IRF8 have been shown to repress BLIMP1 expression, and loss of each promotes ASC differentiation [
58,
62]. Interestingly, the expression of both BACH2 and IRF8 is under the control of PAX5 [
63], suggesting an indirect effect of decreased expression of BLIMP1. Collectively, we have demonstrated that iguratimod treatment in activated B cells represses ASC differentiation program while promotes B cell program. It is conceivable that the derepression of B cell identity TFs could be via direct or indirect effect of decreased BLIMP1 expression; however, there still could be a possibility that iguratimod may additionally dampen B cell terminal differentiation independent of the PKC/EGR1/BLIMP1 axis, and more studies are needed to elucidate the detailed mechanisms.
EGR1 expression is also strongly increased in both fibroblast-like synovial cell and monocyte from RA patients [
64], and cluster analysis shows that EGR1 is one of the top hub TFs in the regulatory network of RA [
65]. It will be interesting to see whether iguratimod could inhibit EGR1 expression in other cell types and whether EGR1 could also be a novel treatment target in RA.