siRNAs
First-generation siRNAs, such as ARC-520, demonstrated the proof-of-principle reduction in HBsAg levels in chimpanzee and human studies. Notably, greater declines in HBsAg levels were observed in HBeAg-positive compared to HBeAg-negative chimpanzees. This was later shown to be as a result of changes in the target sequence of the mRNA encoded by integrated but not cccDNA-derived mRNA. In clinical trials, first-generation siRNAs (ARC-520 and ARC-521) showed modest reduction in HBsAg (~ 0.5 log IU/mL) in both HBeAg-positive and HBeAg-negative virally suppressed subjects [
41]. However, the development of ARC-520/521 was halted due to hepatotoxicity attributed to the delivery vehicle.
Second-generation, GalNAc-conjugated siRNAs (JNJ-3989, VIR-2218, RG-6346, and AB-729) were developed to target mRNAs transcribed from cccDNA and integrated DNA and improve delivery. These agents have shown promising results with no significant safety concerns [
20,
42,
43]. A 2–2.5 log
10 IU/mL decline in HBsAg levels can be achieved after one to four doses, which persisted for months post-treatment. Almost all patients achieve at least a 1 log
10 IU/mL reduction in HBsAg levels, which may be sustained up to 1 year after the last dose. However, the decline in the HBsAg level was observed to plateau around 20 weeks of treatment, raising concerns about the long-term efficacy of siRNA-based approaches. In a trial involving AB-729, the initial decline in HBsAg plateaued after a few weeks, and no participant achieved HBsAg loss. Mild ALT elevation and increased HBV-specific T cell activation markers were associated with HBsAg decline in some participants [
23].
Given the limitations and absence of a functional cure with siRNA monotherapy, combination therapy is a logical next step. Combining AB-729 with NAs in HBeAg-negative participants demonstrated a marked and sustained decline in HBsAg and HBV DNA levels without ALT flares in participants who achieved HBsAg < 100 IU/mL [
44]. In another study combining VIR-2218 with the monoclonal antibody VIR-3434, most participants achieved HBsAg level of < 10 IU/mL at the end of treatment, but none achieved a functional cure [
45]. Another trial combining VIR-2218 with PegIFNα resulted in a greater decrease in HBsAg levels, compared to VIR-2218 monotherapy, 2.55 vs. 1.89 log
10 IU/mL, with 15.6% of subjects achieving HBsAg loss by the end of treatment [
24].
Many questions remain to be clarified with the use of siRNA in chronic HBV infection. The optimal duration is unknown, which agent to combine it with and in what sequence. Not all combinations will result in synergy as was observed in a trial combining a siRNA and capsid assembly modulator [
46]. The results of several ongoing combination trials with various agents are eagerly awaited.
ASOs
In preclinical studies, ASOs have shown promise in reducing serum HBsAg and HBV DNA levels [
47]. In clinical trials, GalNAc-conjugated ASOs, RG6004 and GSK3389404, only resulted in moderate dose-dependent decline in HBsAg levels. These reductions were transient, and HBsAg levels rebounded to baseline within a few weeks after therapy cessation. Consequently, these ASOs are no longer in development [
48,
49].
In a phase 2 trial of bepirovirsen, an unconjugated ASO, at a dose of 300 mg per week for 24 weeks, sustained HBsAg, and HBV DNA loss was observed in 9 to 10% of participants [
25•]. ALT flares were noted in 40% of patients receiving bepirovirsen monotherapy. This was an important study demonstrating that a functional cure could be achieved with short-duration finite monotherapy. Similar to siRNAs, ASOs are safe and well tolerated.
Whether the sustained reduction in HBsAg levels achieved with siRNAs and ASOs will result in HBsAg clearance over time remains to be determined. Nevertheless, these are promising agents that likely will be part of a functional cure regimen.
3.
Inhibitors of capsid assembly
Capsid assembly modulators (CAMs), also known as core protein allosteric modulators (CpAMs), target the HBV core protein. By modifying nucleocapsid assembly, the site of genome replication, CAMs disrupt the viral life cycle and inhibit HBV replication. These compounds bind to a specific hydrophobic pocket between core protein dimers, inducing the formation of aberrant nucleocapsids or empty nucleocapsids, depending on the type of CAM [
50]. Two types of CAMs have been described based on their mechanism of action: Type 1 CAMs (CAM-As) induce the formation of aberrantly assembled nucleocapsids, while type 2 CAMs (CAM-Es) result in the formation of morphologically normal but empty nucleocapsids [
51].
CAMs offer several therapeutic advantages over other novel agents in development, including an oral route of administration and potent inhibition of viral replication across different genotypes. CAM-As, such as RO7049389, have shown significant reductions in HBV DNA and RNA levels in HBeAg-positive subjects [
52]. CAM-Es, including vebicorvir, JNJ-6379, and JNJ-0440, have demonstrated similar declines in HBV DNA and RNA without significant effects on HBsAg levels [
27,
53,
54]. CAMs alone do not have a measurable impact on HBV antigens and carry an increased risk of resistance, necessitating combination therapy with other antiviral agents. Similar to NAs, discontinuation of CAM treatment can lead to viral relapse and hepatitis flares.
Current CAMs must invariably be used as combination therapy due to concerns for resistance. When combined with NAs, CAMs demonstrate faster and greater inhibition of viral replication and transcription compared to NA alone. They can also achieve a deeper suppression of HBV DNA and HBV RNA in subjects already receiving NA treatment [
55]. However, minimal changes were noted on HBeAg and HBsAg levels with vebicorvir alone or in combination with entecavir [
55]. Unfortunately, vebicorvir is no longer in development because of recognized hepatotoxicity [
56]. However, several other more potent second-generation CAMs including ABI-H2158, ABI-H3733, AB-836, ALG-000184 [
57], and VNRX-9945 are currently under development and hold promise for greater efficacy and improved safety [
58,
59].
CAMs have also been combined with siRNAs and NAs. The REEF1 trial evaluated a triple combination regimen of a siRNA (JNJ-3989), with a CAM (bersacapavir, formerly JNJ-6379), and NA. Bersacapavir alone demonstrated only minimal declines in HBsAg levels. Surprisingly, the triple combination regimen resulted in a lower reduction in HBsAg levels compared to the dual combination of siRNA and NA, after 48 weeks of treatment [
60]. In the REEF-2 trial, non-cirrhotic HBeAg-negative HBV subjects on NAs received add-on treatment with bersacapavir and JNJ-3989 or placebo for 48 weeks. At the end of the treatment, the active treatment group showed a significant reduction in HBsAg levels, while the placebo group had minimal reduction. Although 71% of participants in the active treatment group achieved HBsAg levels below 100 IU/mL, none achieved HBsAg clearance. One subject experienced a severe hepatitis flare following withdrawal of NA therapy and required liver transplantation [
61]. A promising third-generation CAM, AB-836 with potent inhibition of HBV replication (declines of 3.04 to 3.55 log
10 IU/mL at day 28) depending on AB-836 dose, without significant HBsAg decline has been discontinued due to hepatotoxicity [
59].
The lack of reduction of HBeAg and HBsAg with CAMs is a major limitation of this class of drugs. Thus, the exact role of CAMs in a curative regimen remains to be determined.
Permanent silencing or elimination of cccDNA is the sine qua non for achieving a cure for HBV infection and preventing the risk of reactivation [
62]. Targeting cccDNA is a challenge due to its nuclear location. Nevertheless, there are several promising approaches in development. One is to inhibit the multiple steps in its formation from rcDNA, another is to prevent the nuclear import of rcDNA by capsid-targeting drugs. An alternate approach is to silence its transcriptional activity by inducing the host cell’s epigenetic machinery, or by blocking the de-silencing activity of HBV X protein (HBx). Finally, existing cccDNA may be degraded directly using genome editing with designer nucleases or indirectly through immune-mediated mechanisms, such as APOBEC enzymes [
63].
Several candidate molecules have been shown in vitro to disrupt the conversion of rcDNA to cccDNA. CCC-0975, a disubstituted sulfonamide inhibitor, may inhibit cccDNA formation [
64]. However, it primarily affects new cccDNA formation and does not impact the established pool of cccDNA. Another potential candidate, CCC_R08, is an oral cccDNA inhibitor that has shown sustained reductions in HBsAg and cccDNA in mouse models [
65]. Further research is needed to explore the clinical effectiveness of such a strategy in the clinic.
Interferon-alpha and lymphotoxin-β-receptor activation have been shown to degrade cccDNA via APOBEC 3A and 3B-mediated deamination of the negative genomic strand. The Farnesoid X receptor (FXR-α) was shown to be a proviral host factor for HBV. Paradoxically, FXR-α agonists were shown to decrease cccDNA levels [
66]. In early clinical studies, it was shown that the combination of vonafexor (EYP001), an FXR agonist, and Peg-IFN α may enhance the action of Peg-IFN α, based on the magnitude in reduction of HBsAg levels. This remains to be proven as there was no Peg-IFN α control arm [
67].
cccDNA is organized into a chromatin-like structure, making it amenable to epigenetic manipulation. Gene editing methods, including zinc finger nucleases, transcription activator–like effector nucleases, and the CRISPR/Cas9 system, have been shown to degrade cccDNA and are promising strategies under investigation [
68,
69]. However, challenges include the delivery of the editing tools to all infected hepatocytes, cleaving integrated HBV DNA, and the risk of off-target effects.
Targeting HBX could offer a durable approach to silencing cccDNA. Nitazoxanide, an antiparasitic agent, and pevonedistat, a neddylation inhibitor, have shown potential in inhibiting cccDNA formation by targeting HBX, a protein essential for viral transcription, and its interaction with DDB1 [
70].
5.
Inhibitors of HBV polymerase
The HBV polymerase, the sole viral protein with enzymatic action, plays a critical role in viral replication. NAs widely used in HBV treatment primarily target the reverse transcriptase activity of the HBV polymerase [
5•]. However, despite their effectiveness in inhibiting viral replication, they do not affect cccDNA and have a limited impact on HBsAg. Therefore, replication rapidly returns in a majority of patients once the NA is discontinued necessitating long-term treatment. Current efforts are focused on improving potency and reducing metabolite toxicity of newer NAs such as pradefovir [
30,
31]. Targeting the other enzymatic function of the HBV polymerase, its RNAseH function, is being explored. RNAseH degrades the pgRNA after it serves as the template for negative strand synthesis. Although many RNAseH inhibitors have been identified, none is currently in clinical development.
6.
Inhibitors of HBsAg release
Clearance of HBsAg is the current goal of HBV therapies in development. Consequently, there is interest in developing agents that can reduce HBsAg levels. Nucleic acid polymers (NAPs) [
33] are one potential approach being explored [
71].
NAPs are synthetic oligonucleotides that selectively target the assembly and secretion of HBV subviral particles. They have little to no effect on mature virion secretion. By reducing circulating HBsAg levels, NAPs are believed to restore immunomodulation and promote host-mediated clearance [
72]. In a small study, the addition of NAPs (REP 2139 or REP 2165) to a regimen of tenofovir and PEG-IFN resulted in sustained suppression of HBsAg to undetectable levels in 44% of participants. These participants also developed anti-HBs antibodies, suggesting either a potential restoration of the immune response or a shifting of the balance between levels of HBsAg and anti-HBs in circulation [
33]. However, it is important to note that a majority of NAP-treated subjects experienced grade 3–4 ALT flares. Larger controlled studies are needed to further evaluate the efficacy and safety of NAPs.
A similar compound, S-antigen transport–inhibiting oligonucleotide polymers (STOPS), which is a locked nucleic acid-modified version of a NAP, is no longer in development due to the minimal effect on HBsAg levels [
73].